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Traits
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Traits
:
Leg fat mass (left)
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chr19:3,309,021-5,052,147
Best TWAS P=8.16e-10 · Best GWAS P=1.32e-12 conditioned to 0.0126
3.4M
3.6M
3.8M
4M
4.2M
4.4M
4.6M
4.8M
5M
0
2
4
6
8
10
12
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Colon Sigmoid
MAP2K2
0.20
0.11
lasso
3
0.13
3.0e-05
-5.6
-6.1
8.2e-10
0.71
0.02
0.85
TRUE
3
ROSMAP
Brain Pre-frontal Cortex
PIAS4
0.14
0.12
lasso
6
0.11
1.6e-13
-6.0
-6.0
1.6e-09
0.66
0.60
0.40
TRUE
5
YFS
Blood
PIAS4
0.06
0.02
bslmm
369
0.04
4.8e-14
-6.0
-5.9
3.6e-09
0.67
0.02
0.98
FALSE
2
GTEx
Heart Left Ventricle
AC007292.4
0.18
0.00
enet
32
0.03
7.0e-03
-2.8
5.3
1.4e-07
-0.39
0.05
0.38
FALSE
4
YFS
Blood
MAP2K2
0.02
0.00
blup
373
0.01
5.9e-03
2.6
5.2
2.2e-07
-0.51
0.09
0.45
FALSE