Best TWAS P=1.96e-09 · Best GWAS P=4.1e-09 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | CDK6 | 0.12 | 0.1 | lasso | 2 | 0.10 | 1.9e-12 | 5.3 | 5.3 | 1.4e-07 | 0.89 | 0.06 | 0.94 | FALSE |
| 2 | GTEx | Testis | CDK6 | 0.10 | 0.1 | lasso | 3 | 0.09 | 8.0e-05 | 5.9 | -6.0 | 2.0e-09 | -0.96 | 0.01 | 0.99 | TRUE |