Best TWAS P=3.3e-08 · Best GWAS P=6.71e-11 conditioned to 2.1e-05
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Skin Sun Exposed Lower leg | CENPM | 0.05 | 0.00 | enet | 8 | 0.02 | 1.5e-02 | -4.9 | 5.5 | 3.3e-08 | -0.53 | 0.07 | 0.43 | TRUE |
| 2 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | WBP2NL | 0.06 | 0.04 | blup | 140 | 0.03 | 9.6e-05 | -4.7 | 5.4 | 7.3e-08 | -0.53 | 0.57 | 0.25 | FALSE |