Best TWAS P=5.68e-08 · Best GWAS P=2.36e-06 conditioned to 0.00044
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | DOPEY2 | 0.05 | 0.01 | blup | 115 | 0.02 | 5.6e-03 | -3.4 | -5.2 | 1.5e-07 | -0.35 | 0.01 | 0.04 | TRUE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | CBR1 | 0.45 | 0.09 | lasso | 5 | 0.22 | 5.1e-13 | 2.8 | -5.4 | 5.7e-08 | 0.01 | 0.02 | 0.64 | TRUE |