Best TWAS P=7.78e-09 · Best GWAS P=2.26e-06 conditioned to 0.134
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Prostate | MLPH | 0.33 | 0.02 | enet | 26 | 0.12 | 0.00059 | -2.0 | 5.8 | 7.8e-09 | -0.61 | 0.04 | 0.35 | TRUE |
2 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | MLPH | 0.06 | 0.01 | enet | 10 | 0.02 | 0.00369 | -4.7 | 5.2 | 2.3e-07 | -0.76 | 0.01 | 0.63 | FALSE |