[Hub]/) : Traits : Leg predicted mass (left) :

chr5:125,679,739-128,220,643

Best TWAS P=1.5e-40 · Best GWAS P=1.75e-39 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex FLJ33630 0.06 0.07 lasso 6 0.07 8.6e-09 -3.17 -6.4 1.3e-10 -0.52 0.62 0.38 FALSE
2 GTEx Adipose Subcutaneous CTC-228N24.3 0.24 0.15 enet 16 0.20 3.4e-16 13.15 -12.4 1.5e-35 -0.97 0.00 1.00 FALSE
3 GTEx Adipose Visceral Omentum CTC-228N24.3 0.24 0.16 enet 19 0.16 1.8e-08 13.15 -11.5 2.3e-30 -0.80 0.00 1.00 FALSE
4 GTEx Adrenal Gland CTC-228N24.3 0.34 0.10 lasso 9 0.09 4.2e-04 9.96 -11.2 5.9e-29 -0.88 0.03 0.96 FALSE
5 GTEx Artery Aorta CTC-228N24.3 0.20 0.04 lasso 8 0.07 7.4e-05 5.63 -11.9 1.6e-32 -0.91 0.11 0.86 FALSE
6 GTEx Artery Coronary CTC-228N24.3 0.31 0.10 lasso 3 0.10 2.9e-04 12.51 -12.5 8.2e-36 -0.86 0.01 0.90 FALSE
7 GTEx Artery Tibial CTC-228N24.3 0.20 0.16 lasso 7 0.14 3.0e-11 13.15 -13.3 1.5e-40 -0.99 0.00 1.00 TRUE
8 GTEx Brain Cerebellar Hemisphere SLC12A2 0.45 -0.01 enet 20 0.01 2.1e-01 9.74 -7.7 1.9e-14 -0.46 0.04 0.33 FALSE
9 GTEx Brain Cerebellar Hemisphere CTC-228N24.3 0.25 0.00 lasso 6 0.05 2.2e-02 0.24 -6.0 1.9e-09 -0.49 0.03 0.62 FALSE
10 GTEx Brain Cerebellum C5orf63 0.20 0.07 lasso 3 0.05 1.7e-02 4.72 -5.3 8.9e-08 0.04 0.05 0.79 TRUE
11 GTEx Brain Cerebellum CTC-228N24.3 0.31 0.04 lasso 5 0.12 2.9e-04 13.15 -10.9 7.9e-28 -0.84 0.01 0.97 FALSE
12 GTEx Cells EBV-transformed lymphocytes CTC-228N24.3 0.24 -0.01 enet 26 0.04 2.2e-02 8.37 -8.4 2.9e-17 -0.57 0.03 0.70 FALSE
13 GTEx Cells Transformed fibroblasts CTC-228N24.3 0.24 0.16 enet 26 0.16 8.6e-12 13.15 -12.4 3.1e-35 -0.89 0.00 1.00 FALSE
14 GTEx Colon Sigmoid CTC-228N24.3 0.20 0.22 enet 11 0.23 1.1e-08 12.51 -12.3 7.8e-35 -0.92 0.01 0.99 FALSE
15 GTEx Esophagus Gastroesophageal Junction CTC-228N24.3 0.20 0.04 enet 22 0.13 2.1e-05 -3.18 -7.0 2.2e-12 -0.51 0.05 0.68 FALSE
16 GTEx Esophagus Mucosa CTC-228N24.3 0.18 0.14 enet 11 0.14 9.8e-10 13.15 -12.9 5.6e-38 -0.93 0.00 1.00 FALSE
17 GTEx Esophagus Muscularis CTC-228N24.3 0.24 0.08 enet 29 0.14 1.4e-08 12.51 -9.9 5.2e-23 -0.75 0.01 0.99 FALSE
18 GTEx Heart Atrial Appendage CTC-228N24.3 0.22 0.07 lasso 5 0.07 4.1e-04 12.46 -10.7 1.6e-26 -0.87 0.00 0.99 FALSE
19 GTEx Heart Left Ventricle CTC-228N24.3 0.24 0.15 lasso 7 0.19 1.9e-10 11.82 -10.8 4.6e-27 -0.84 0.01 0.99 FALSE
20 GTEx Lung CTC-228N24.3 0.18 0.14 enet 16 0.14 3.2e-11 13.15 -11.7 2.1e-31 -0.95 0.00 1.00 FALSE
21 GTEx Muscle Skeletal CTC-228N24.3 0.25 0.20 lasso 5 0.21 1.6e-20 13.15 -12.1 9.0e-34 -0.95 0.00 1.00 FALSE
22 GTEx Nerve Tibial CTC-228N24.3 0.32 0.18 lasso 10 0.16 1.6e-11 12.51 -12.6 1.3e-36 -0.96 0.01 0.99 FALSE
23 GTEx Pancreas CTC-228N24.3 0.14 0.19 lasso 2 0.17 1.1e-07 13.15 -13.1 1.7e-39 -1.00 0.00 1.00 FALSE
24 GTEx Skin Not Sun Exposed Suprapubic CTC-228N24.3 0.29 0.21 lasso 7 0.22 1.7e-12 13.15 -13.0 7.4e-39 -0.97 0.00 1.00 FALSE
25 GTEx Skin Sun Exposed Lower leg CTC-228N24.3 0.29 0.17 enet 12 0.22 4.3e-18 12.46 -12.5 1.2e-35 -0.90 0.00 1.00 FALSE
26 GTEx Spleen CTC-228N24.3 0.26 0.03 enet 15 0.05 1.8e-02 5.63 -10.3 1.1e-24 -0.66 0.04 0.56 FALSE
27 GTEx Stomach SLC12A2 0.23 0.17 enet 19 0.17 1.6e-08 7.88 -8.3 9.9e-17 -0.45 0.80 0.16 FALSE
28 GTEx Stomach CTC-228N24.3 0.17 0.04 lasso 6 0.08 1.5e-04 11.82 -11.9 9.8e-33 -0.81 0.02 0.95 FALSE
29 GTEx Testis CTC-228N24.3 0.30 0.16 lasso 6 0.14 1.1e-06 13.15 -11.8 5.8e-32 -0.93 0.00 1.00 FALSE
30 GTEx Thyroid CTC-228N24.3 0.31 0.15 enet 32 0.18 4.6e-14 13.15 -10.5 8.2e-26 -0.78 0.00 1.00 FALSE
31 METSIM Adipose CTC-228N24.3 0.17 0.19 lasso 6 0.18 1.9e-26 13.15 -13.1 4.4e-39 -1.00 0.00 1.00 FALSE
32 ROSMAP Brain Pre-frontal Cortex CTC-228N24.3 0.15 0.09 lasso 3 0.12 8.0e-15 13.15 -11.3 1.3e-29 -0.88 0.00 1.00 FALSE
33 The Cancer Genome Atlas Breast Invasive Carcinoma FLJ33630 0.05 0.04 enet 14 0.03 2.1e-07 13.15 -12.3 1.3e-34 -0.88 0.00 1.00 FALSE
34 The Cancer Genome Atlas Glioblastoma Multiforme FLJ33630 0.38 0.20 lasso 5 0.17 6.5e-06 13.15 -13.1 4.5e-39 -0.99 0.00 1.00 FALSE
35 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma FLJ33630 0.10 0.07 lasso 3 0.08 7.0e-09 12.51 -12.4 3.5e-35 -0.95 0.00 1.00 FALSE
36 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma FLJ33630 0.10 0.06 enet 18 0.08 2.0e-09 13.15 -10.0 1.5e-23 -0.79 0.00 1.00 FALSE
37 The Cancer Genome Atlas Brain Lower Grade Glioma FBN2 0.12 0.02 enet 17 0.05 1.7e-06 9.03 -7.1 1.2e-12 -0.53 0.04 0.93 FALSE
38 The Cancer Genome Atlas Brain Lower Grade Glioma FLJ33630 0.19 0.16 enet 4 0.16 1.2e-17 13.12 -13.0 6.5e-39 -1.00 0.00 1.00 FALSE
39 The Cancer Genome Atlas Lung Adenocarcinoma FLJ33630 0.07 0.05 lasso 1 0.04 1.3e-05 12.51 -12.5 7.0e-36 -0.96 0.01 0.99 FALSE
40 The Cancer Genome Atlas Lung Squamous Cell Carcinoma FLJ33630 0.09 0.08 lasso 4 0.09 4.9e-10 13.15 -13.1 3.1e-39 -1.00 0.00 1.00 FALSE
41 The Cancer Genome Atlas Pancreatic Adenocarcinoma FLJ33630 0.08 0.03 lasso 2 0.04 5.7e-03 12.51 -12.7 6.7e-37 -0.90 0.01 0.89 FALSE
42 The Cancer Genome Atlas Prostate Adenocarcinoma FLJ33630 0.08 0.05 blup 70 0.04 4.4e-05 12.51 -12.5 1.1e-35 -0.86 0.00 1.00 FALSE
43 The Cancer Genome Atlas Prostate Adenocarcinoma SLC12A2 0.04 0.02 enet 17 0.02 3.3e-03 12.51 7.7 2.0e-14 0.69 0.01 0.86 FALSE
44 The Cancer Genome Atlas Stomach Adenocarcinoma FLJ33630 0.07 0.02 blup 70 0.02 1.5e-02 7.49 -8.8 1.5e-18 -0.48 0.12 0.14 FALSE
45 The Cancer Genome Atlas Testicular Germ Cell Tumors FLJ33630 0.26 0.14 lasso 3 0.13 2.2e-05 13.15 -13.2 1.1e-39 -0.99 0.00 1.00 FALSE
46 The Cancer Genome Atlas Thyroid Carcinoma FLJ33630 0.10 0.10 lasso 2 0.09 5.3e-09 13.12 -13.1 3.4e-39 -1.00 0.00 1.00 FALSE