TWAS
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Traits
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Arm fat percentage (right)
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chr1:46,982,455-51,180,660
Best TWAS P=4.39e-11 · Best GWAS P=5.6e-13 conditioned to 0.000174
47M
47.5M
48M
48.5M
49M
49.5M
50M
50.5M
51M
0
2
4
6
8
10
12
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
YFS
Blood
TAL1
0.03
0.02
bslmm
402
0.02
2.6e-06
6.7
-6.6
4.4e-11
0.03
0.01
0.99
TRUE
1
METSIM
Adipose
AGBL4
0.02
0.02
lasso
5
0.02
1.3e-03
6.3
-6.4
1.4e-10
-0.85
0.17
0.81
TRUE
3
The Cancer Genome Atlas
Bladder Urothelial Carcinoma
TAL1
0.03
0.02
blup
75
0.02
9.2e-03
5.7
5.5
4.9e-08
0.00
0.02
0.82
FALSE