Best TWAS P=1.87e-07 · Best GWAS P=9.96e-06 conditioned to 8.71e-06
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Esophagus Mucosa | FBXO27 | 0.66 | 0.36 | enet | 33 | 0.55 | 4.1e-43 | 4.3 | 5.2 | 1.9e-07 | 0.01 | 0.01 | 0.92 | TRUE |
2 | GTEx | Esophagus Mucosa | CTB-189B5.3 | 0.61 | 0.34 | enet | 18 | 0.51 | 3.5e-39 | 4.0 | 5.2 | 2.4e-07 | 0.00 | 0.01 | 0.88 | FALSE |