3205 significantly associated models · 699 unique genes
.
# | chr | p0 | p1 | # assoc genes | # joint genes | best TWAS P | best SNP P | cond SNP P | % var exp | joint genes |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1 | 752566 | 3172702 | 7 | 3 | 2.1e-11 | 9.1e-09 | 4.5e-02 | 88 | RP1-283E3.4 RP3-395M20.12 RP5-890O3.9 |
2 | 1 | 31494475 | 34063516 | 4 | 3 | 1.7e-09 | 3.7e-10 | 3.7e-09 | 11 | BAI2 S100PBP TMEM54 |
3 | 1 | 39258674 | 40737589 | 4 | 1 | 3.5e-12 | 4.4e-12 | 1.5e-02 | 88 | PABPC4 |
4 | 1 | 42153335 | 43576321 | 1 | 1 | 1.6e-08 | 4.3e-11 | 9.2e-09 | 24 | RIMKLA |
5 | 1 | 46982455 | 51180660 | 3 | 2 | 1.3e-12 | 1.5e-15 | 1.5e-05 | 70 | AGBL4 TAL1 |
6 | 1 | 61448835 | 63322743 | 2 | 1 | 2.5e-10 | 1.3e-13 | 2.7e-06 | 60 | TM2D1 |
7 | 1 | 66019891 | 67086881 | 1 | 1 | 1.6e-07 | 1.1e-09 | 1.3e-03 | 72 | PDE4B |
8 | 1 | 71163715 | 73435171 | 1 | 1 | 5.1e-16 | 1.4e-19 | 4.1e-09 | 58 | NEGR1 |
9 | 1 | 77747248 | 79699821 | 3 | 2 | 2.2e-10 | 1.1e-25 | 1.6e-16 | 38 | DNAJB4 GIPC2 |
10 | 1 | 83640176 | 85162753 | 1 | 1 | 6.4e-08 | 4.6e-08 | 6.2e-03 | 75 | TTLL7 |
11 | 1 | 106906072 | 108724766 | 2 | 3 | 4.0e-10 | 7.1e-09 | 1.0e+00 | 100 | NTNG1 PRMT6 |
12 | 1 | 109453129 | 110834259 | 1 | 1 | 2.5e-07 | 9.5e-07 | 1.0e+00 | 100 | GNAI3 |
13 | 2 | 15703 | 1384725 | 2 | 1 | 1.8e-09 | 6.0e-52 | 2.4e-46 | 11 | AC092159.2 |
14 | 2 | 24324172 | 26088769 | 7 | 10 | 1.4e-44 | 4.2e-36 | NaN | NaN | ADCY3 CENPO POMC PTRHD1 RP11-443B20.1 |
15 | 2 | 26223547 | 27689899 | 3 | 1 | 6.4e-14 | 2.7e-13 | 1.0e+00 | 100 | KCNK3 |
16 | 2 | 35883253 | 37567226 | 5 | 1 | 4.9e-11 | 8.7e-11 | 1.3e-01 | 94 | CRIM1 |
17 | 2 | 53583159 | 55231928 | 2 | 1 | 1.3e-08 | 4.3e-09 | 7.5e-09 | 3 | ACYP2 |
18 | 2 | 68850921 | 70593838 | 2 | 1 | 8.4e-09 | 1.2e-07 | 7.4e-01 | 100 | GFPT1 |
19 | 2 | 86095201 | 87510868 | 1 | 1 | 1.4e-07 | 1.3e-07 | 1.9e-01 | 94 | AC015971.2 |
20 | 2 | 99468341 | 101731705 | 3 | 1 | 4.7e-12 | 1.3e-11 | 2.5e-05 | 61 | AFF3 |
21 | 2 | 143190742 | 145209076 | 1 | 1 | 3.8e-08 | 7.4e-07 | 1.5e-01 | 92 | ARHGAP15 |
22 | 2 | 164657815 | 166396485 | 2 | 2 | 6.8e-11 | 3.4e-12 | 6.1e-01 | 100 | COBLL1 GRB14 |
23 | 2 | 171867383 | 173555880 | 4 | 1 | 2.9e-08 | 1.9e-08 | 5.5e-02 | 88 | AC068039.4 |
24 | 2 | 174238261 | 175812508 | 1 | 1 | 5.1e-09 | 1.8e-08 | 4.4e-01 | 98 | OLA1 |
25 | 2 | 197660966 | 199259516 | 3 | 1 | 1.6e-07 | 2.2e-08 | 4.9e-02 | 88 | HSPD1 |
26 | 2 | 229929352 | 231485512 | 2 | 1 | 2.3e-09 | 2.0e-14 | 6.3e-10 | 35 | FBXO36 |
27 | 3 | 11631498 | 13169322 | 1 | 1 | 1.9e-08 | 4.3e-11 | 1.7e-04 | 68 | PPARG |
28 | 3 | 15223994 | 16612886 | 2 | 1 | 2.4e-08 | 9.2e-08 | 1.0e+00 | 100 | AC090945.1 |
29 | 3 | 35439546 | 36079910 | 1 | 1 | 8.4e-08 | 1.0e-10 | 7.8e-06 | 52 | ARPP21 |
30 | 3 | 40537829 | 41986787 | 1 | 1 | 9.6e-09 | 9.7e-09 | 1.0e+00 | 100 | CTNNB1 |
31 | 3 | 43996504 | 45398042 | 1 | 1 | 4.8e-09 | 3.2e-08 | 1.2e-07 | 8 | ZNF35 |
32 | 3 | 48029118 | 51077419 | 27 | 6 | 8.2e-33 | 8.4e-31 | NaN | NaN | MST1R RASSF1 RBM6 RNF123 |
33 | 3 | 84317575 | 86808226 | 1 | 2 | 8.3e-12 | 8.2e-17 | 8.4e-07 | 65 | CADM2 |
34 | 3 | 87495550 | 88911119 | 2 | 1 | 2.5e-09 | 2.6e-09 | 1.8e-03 | 73 | ZNF654 |
35 | 3 | 93537290 | 94472527 | 4 | 2 | 2.3e-11 | 1.2e-19 | 6.9e-07 | 70 | ARL13B DHFRL1 |
36 | 3 | 107181540 | 108633112 | 1 | 1 | 1.8e-08 | 6.0e-10 | 5.4e-05 | 57 | IFT57 |
37 | 3 | 119254385 | 119778489 | 1 | 1 | 2.6e-08 | 3.9e-07 | 1.0e-02 | 74 | NR1I2 |
38 | 3 | 140350567 | 141867638 | 1 | 1 | 1.0e-16 | 3.6e-15 | 2.6e-04 | 78 | ZBTB38 |
39 | 3 | 153142317 | 154733231 | 3 | 1 | 1.7e-10 | 4.3e-10 | 8.1e-04 | 71 | ARHGEF26 |
40 | 3 | 182655858 | 184700426 | 4 | 2 | 3.4e-10 | 1.4e-08 | 2.3e-02 | 84 | ECE2 KLHL24 |
41 | 3 | 185520342 | 186072370 | 1 | 1 | 3.0e-13 | 9.7e-16 | 3.5e-04 | 80 | ETV5 |
42 | 3 | 195279119 | 196855644 | 3 | 1 | 4.2e-08 | 3.9e-07 | 4.9e-01 | 98 | SLC51A |
43 | 4 | 452106 | 1011115 | 1 | 1 | 9.2e-08 | 1.2e-05 | 2.4e-02 | 73 | PCGF3 |
44 | 4 | 2229206 | 3943984 | 5 | 3 | 3.5e-09 | 2.3e-07 | 3.9e-01 | 97 | HTT NOP14 RNF4 |
45 | 4 | 52683607 | 53598975 | 2 | 1 | 1.7e-09 | 3.2e-09 | 1.7e-01 | 95 | SGCB |
46 | 4 | 67642191 | 69098006 | 1 | 1 | 1.4e-07 | 4.6e-10 | 1.8e-07 | 30 | CENPC |
47 | 4 | 80512228 | 81031736 | 1 | 1 | 1.7e-09 | 9.4e-10 | 5.5e-03 | 80 | GDEP |
48 | 5 | 42878849 | 44296986 | 1 | 1 | 2.3e-09 | 7.9e-08 | 6.1e-03 | 74 | NNT-AS1 |
49 | 5 | 73626450 | 75704085 | 9 | 2 | 6.4e-29 | 2.5e-30 | 9.5e-03 | 95 | GCNT4 POC5 |
50 | 5 | 76597461 | 78287579 | 1 | 1 | 1.2e-13 | 2.4e-12 | 8.0e-02 | 94 | AP3B1 |
51 | 5 | 80012251 | 81746129 | 1 | 1 | 7.0e-09 | 3.4e-11 | 3.4e-04 | 71 | SSBP2 |
52 | 5 | 86867897 | 88677293 | 3 | 2 | 8.5e-19 | 1.0e-19 | 2.4e-07 | 68 | CTC-498M16.2 LINC00461 |
53 | 5 | 95168155 | 96832363 | 2 | 1 | 6.3e-11 | 2.3e-08 | 4.9e-07 | 19 | CAST |
54 | 5 | 122434666 | 123002130 | 1 | 1 | 4.1e-09 | 3.1e-12 | 3.0e-05 | 64 | CEP120 |
55 | 5 | 129797129 | 131202801 | 1 | 1 | 1.7e-09 | 1.3e-07 | 3.2e-03 | 69 | HINT1 |
56 | 5 | 138349164 | 140185473 | 2 | 1 | 3.8e-13 | 2.0e-15 | 1.2e-08 | 48 | CXXC5 |
57 | 5 | 152677967 | 154117397 | 1 | 1 | 8.7e-09 | 4.0e-11 | 2.4e-07 | 39 | FAM114A2 |
58 | 5 | 169590807 | 171533656 | 2 | 1 | 5.9e-13 | 3.1e-15 | 1.1e-03 | 83 | RANBP17 |
59 | 6 | 25035920 | 26689223 | 4 | 2 | 8.8e-19 | 5.0e-24 | 2.2e-13 | 47 | LRRC16A U91328.19 |
60 | 6 | 33686103 | 36121375 | 8 | 10 | 1.3e-39 | 2.0e-36 | NaN | NaN | C6orf106 RPL10A RPS10 UHRF1BP1 |
61 | 6 | 41042590 | 42907327 | 4 | 2 | 1.0e-10 | 4.9e-11 | 3.4e-03 | 80 | MED20 UBR2 |
62 | 6 | 51230788 | 52198802 | 1 | 1 | 8.6e-09 | 5.1e-12 | 1.2e-04 | 69 | PKHD1 |
63 | 6 | 53184508 | 54821152 | 1 | 1 | 1.6e-07 | 6.3e-07 | 2.3e-02 | 79 | MLIP |
64 | 6 | 108183628 | 109704062 | 1 | 1 | 1.8e-11 | 5.1e-16 | 4.7e-06 | 68 | FOXO3 |
65 | 6 | 125370626 | 126767600 | 1 | 1 | 6.6e-09 | 6.7e-09 | 1.0e+00 | 100 | HEY2 |
66 | 6 | 129638583 | 131163098 | 2 | 1 | 4.1e-11 | 9.2e-10 | 5.5e-01 | 99 | RP11-73O6.3 |
67 | 6 | 131202709 | 132647962 | 1 | 1 | 3.3e-08 | 1.2e-07 | 5.1e-01 | 98 | MED23 |
68 | 6 | 160071844 | 161571560 | 1 | 1 | 4.6e-08 | 2.2e-08 | 6.2e-03 | 76 | SLC22A3 |
69 | 7 | 2032803 | 3581391 | 2 | 1 | 2.6e-14 | 1.8e-12 | 9.4e-01 | 100 | AMZ1 |
70 | 7 | 4776547 | 7318723 | 3 | 2 | 1.7e-07 | 2.2e-08 | 7.6e-07 | 22 | AC092171.4 ZDHHC4 |
71 | 7 | 26437578 | 27826523 | 1 | 1 | 1.1e-07 | 1.5e-09 | 2.2e-03 | 74 | HOTAIRM1 |
72 | 7 | 43821453 | 45498400 | 3 | 1 | 4.4e-12 | 3.5e-12 | 2.6e-02 | 90 | PPIA |
73 | 7 | 73425238 | 78122616 | 20 | 11 | 8.5e-19 | 1.9e-17 | 1.0e+00 | 100 | DTX2P1-UPK3BP1-PMS2P11 GSAP PION PMS2L3 PMS2P5 POM121C RSBN1L STAG3L1 STAG3L2 |
74 | 7 | 91539717 | 93160671 | 1 | 1 | 3.2e-11 | 8.1e-11 | 1.0e+00 | 100 | CDK6 |
75 | 7 | 98244565 | 99827148 | 4 | 1 | 1.7e-09 | 7.8e-10 | 1.0e+00 | 100 | ZKSCAN5 |
76 | 7 | 149948084 | 151373542 | 1 | 1 | 3.1e-07 | 3.9e-11 | 2.3e-05 | 59 | KCNH2 |
77 | 8 | 8092025 | 13120332 | 23 | 16 | 5.6e-14 | 2.6e-12 | NaN | NaN | AF131215.2 AF131215.9 FAM85A FAM85B FAM86B1 MFHAS1 MSRA SOX7 TNKS |
78 | 8 | 21263978 | 24094711 | 5 | 2 | 2.7e-09 | 4.7e-10 | 1.3e-01 | 94 | AC091171.1 SLC25A37 |
79 | 8 | 30012514 | 31433801 | 1 | 1 | 8.0e-09 | 1.4e-10 | 9.0e-04 | 73 | TEX15 |
80 | 8 | 66645549 | 68096452 | 2 | 1 | 1.3e-07 | 1.0e-09 | 2.6e-04 | 64 | ADHFE1 |
81 | 9 | 14857740 | 16758776 | 2 | 1 | 1.7e-22 | 2.6e-18 | 8.4e-01 | 100 | CCDC171 |
82 | 9 | 36590588 | 37277603 | 1 | 1 | 2.1e-07 | 4.1e-07 | 2.8e-04 | 48 | PAX5 |
83 | 9 | 93476005 | 94885207 | 1 | 1 | 1.2e-08 | 4.6e-09 | 5.5e-03 | 78 | NFIL3 |
84 | 9 | 102162230 | 103803109 | 2 | 1 | 5.5e-11 | 5.3e-11 | 1.0e+00 | 100 | INVS |
85 | 9 | 130380101 | 131772389 | 1 | 1 | 4.9e-09 | 9.1e-07 | 7.2e-02 | 87 | RP11-339B21.13 |
86 | 9 | 133532160 | 134063188 | 1 | 1 | 1.8e-07 | 3.2e-08 | 1.1e-02 | 79 | FIBCD1 |
87 | 10 | 20372032 | 22724472 | 3 | 2 | 1.8e-15 | 7.8e-18 | 6.0e-03 | 90 | MLLT10 NEBL |
88 | 10 | 87114668 | 88375496 | 1 | 1 | 5.4e-08 | 6.3e-09 | 1.2e-04 | 56 | GRID1 |
89 | 10 | 98916782 | 100488720 | 2 | 2 | 4.5e-10 | 1.3e-16 | 1.9e-06 | 67 | CRTAC1 GOLGA7B |
90 | 10 | 101975269 | 103362569 | 1 | 1 | 2.1e-10 | 2.7e-10 | 9.4e-03 | 83 | RP11-179B2.2 |
91 | 10 | 103718818 | 105108455 | 1 | 1 | 2.2e-07 | 4.0e-07 | 4.2e-04 | 52 | TRIM8 |
92 | 10 | 113511441 | 115276976 | 1 | 1 | 2.1e-07 | 6.6e-09 | 2.0e-04 | 59 | VTI1A |
93 | 10 | 117894117 | 119582073 | 3 | 1 | 1.0e-10 | 1.5e-11 | 1.0e+00 | 100 | KIAA1598 |
94 | 10 | 125455780 | 127174440 | 2 | 1 | 1.2e-08 | 2.6e-08 | 3.3e-08 | 2 | METTL10 |
95 | 10 | 133309117 | 135192153 | 3 | 3 | 1.8e-09 | 7.5e-10 | 1.0e+00 | 100 | DPYSL4 GPR123 STK32C |
96 | 11 | 198510 | 1534852 | 1 | 1 | 3.0e-07 | 5.3e-07 | 4.4e-08 | -19 | POLR2L |
97 | 11 | 7714238 | 9408426 | 3 | 2 | 5.5e-09 | 1.3e-12 | 3.1e-03 | 83 | STK33 |
98 | 11 | 12611333 | 14105497 | 1 | 1 | 2.2e-07 | 1.4e-10 | 1.5e-04 | 65 | ARNTL |
99 | 11 | 26818083 | 29054545 | 4 | 3 | 2.0e-25 | 7.0e-36 | 3.1e-07 | 83 | BDNFOS LIN7C METTL15 |
100 | 11 | 29646947 | 31288160 | 2 | 1 | 3.9e-10 | 5.3e-11 | 1.9e-03 | 78 | ARL14EP |
101 | 11 | 42881882 | 44607471 | 3 | 1 | 9.7e-22 | 1.7e-21 | 8.3e-03 | 92 | HSD17B12 |
102 | 11 | 46565407 | 48485877 | 17 | 9 | 1.1e-26 | 4.0e-26 | 1.0e+00 | 100 | C1QTNF4 MADD MTCH2 PSMC3 |
103 | 11 | 63295034 | 66919278 | 20 | 6 | 8.2e-12 | 3.4e-11 | 1.2e-05 | 56 | CTD-3074O7.5 KLC2 SNX32 SPDYC VEGFB YIF1A |
104 | 11 | 118241995 | 119751585 | 4 | 1 | 3.0e-11 | 2.0e-08 | 4.9e-01 | 98 | HMBS |
105 | 11 | 121830239 | 123382247 | 1 | 1 | 7.0e-09 | 7.8e-09 | 3.5e-07 | 22 | UBASH3B |
106 | 11 | 130038487 | 131476599 | 2 | 1 | 6.3e-13 | 8.3e-13 | 1.8e-03 | 81 | SNX19 |
107 | 12 | 772458 | 1344141 | 1 | 1 | 1.3e-07 | 2.5e-14 | 1.4e-12 | 14 | RAD52 |
108 | 12 | 49569311 | 51256065 | 2 | 2 | 6.3e-19 | 7.7e-31 | 3.6e-07 | 81 | FAIM2 |
109 | 12 | 55677395 | 57125879 | 5 | 1 | 3.3e-10 | 2.3e-10 | 3.1e-04 | 68 | RPS26 |
110 | 12 | 89116708 | 90682621 | 2 | 1 | 2.2e-12 | 4.3e-15 | 6.1e-08 | 52 | POC1B |
111 | 12 | 107433672 | 108852590 | 2 | 1 | 4.6e-10 | 3.0e-10 | 5.5e-10 | 3 | PRDM4 |
112 | 12 | 109231851 | 111634281 | 5 | 2 | 6.9e-09 | 2.3e-08 | 1.0e+00 | 100 | IFT81 UBE3B |
113 | 12 | 121194565 | 125270773 | 24 | 12 | 1.1e-19 | 6.6e-23 | NaN | NaN | ABCB9 BCL7A CCDC92 CLIP1 KDM2B LRRC43 MLXIP VPS33A WDR66 ZCCHC8 |
114 | 13 | 27300215 | 28717392 | 3 | 2 | 4.9e-10 | 2.7e-11 | 7.8e-02 | 93 | AL137059.1 GTF3A |
115 | 13 | 30336006 | 31886850 | 1 | 1 | 2.9e-08 | 7.9e-10 | 8.0e-03 | 81 | HMGB1 |
116 | 13 | 78492856 | 79931871 | 1 | 1 | 8.7e-08 | 3.7e-15 | 2.6e-14 | 6 | RNF219 |
117 | 13 | 86121175 | 86620040 | 1 | 1 | 1.8e-07 | 1.1e-07 | 1.8e-04 | 50 | SLITRK6 |
118 | 13 | 98109395 | 99797929 | 2 | 1 | 3.1e-08 | 6.2e-08 | 2.3e-01 | 95 | FARP1 |
119 | 13 | 111270363 | 112552523 | 2 | 1 | 5.6e-09 | 1.9e-10 | 1.0e-05 | 52 | TEX29 |
120 | 14 | 21718739 | 22221211 | 1 | 1 | 2.9e-07 | 6.5e-07 | 5.3e-01 | 98 | METTL3 |
121 | 14 | 72695406 | 74192791 | 3 | 1 | 6.0e-10 | 3.6e-06 | 1.6e-02 | 73 | DCAF4 |
122 | 14 | 88057863 | 88700518 | 1 | 1 | 1.6e-07 | 2.1e-06 | 1.6e-01 | 91 | GALC |
123 | 14 | 90643934 | 92390620 | 2 | 1 | 1.6e-08 | 2.2e-09 | 1.6e-02 | 84 | C14orf159 |
124 | 14 | 93011368 | 94495324 | 2 | 2 | 3.7e-11 | 7.6e-16 | 5.4e-03 | 88 | BTBD7 C14orf142 |
125 | 14 | 102544860 | 104892153 | 8 | 2 | 8.7e-11 | 9.3e-14 | 3.3e-05 | 69 | C14orf153 TRAF3 |
126 | 15 | 51040798 | 52922890 | 4 | 2 | 6.5e-09 | 8.9e-09 | 1.0e+00 | 100 | DMXL2 LYSMD2 |
127 | 15 | 55002218 | 56408451 | 1 | 1 | 7.2e-08 | 1.5e-05 | 4.6e-01 | 97 | C15orf65 |
128 | 15 | 65989359 | 68789191 | 7 | 7 | 6.6e-18 | 9.6e-22 | NaN | NaN | IQCH MAP2K1 MAP2K5 SMAD3 |
129 | 15 | 72384483 | 73775043 | 1 | 1 | 1.7e-07 | 3.8e-13 | 4.7e-07 | 52 | ADPGK-AS1 |
130 | 15 | 74488424 | 75864335 | 1 | 1 | 2.8e-07 | 1.3e-07 | 4.3e-02 | 85 | MPI |
131 | 15 | 80743350 | 81292020 | 1 | 1 | 3.5e-08 | 1.0e-08 | 1.1e-02 | 80 | FAM108C1 |
132 | 16 | 86671 | 1137354 | 5 | 1 | 2.4e-11 | 2.4e-11 | 2.8e-02 | 89 | AXIN1 |
133 | 16 | 1828839 | 2488693 | 2 | 2 | 1.3e-07 | 6.0e-09 | 5.6e-01 | 99 | CASKIN1 SLC9A3R2 |
134 | 16 | 2868641 | 5706977 | 7 | 3 | 8.9e-20 | 3.5e-27 | 1.8e-09 | 69 | NLRC3 RP11-462G12.1 UBN1 |
135 | 16 | 14379931 | 15886243 | 2 | 1 | 9.2e-08 | 9.7e-06 | 6.9e-01 | 99 | RRN3 |
136 | 16 | 19178437 | 21147999 | 3 | 2 | 6.3e-12 | 5.3e-11 | 1.0e+00 | 100 | ACSM5 GPRC5B |
137 | 16 | 24162204 | 25620010 | 1 | 1 | 1.0e-11 | 5.7e-12 | 2.9e-02 | 90 | SLC5A11 |
138 | 16 | 27412414 | 31957368 | 86 | 8 | 2.0e-40 | 2.5e-37 | NaN | NaN | AC009133.12 ALDOA MAPK3 PPP4C PRSS53 RP11-1348G14.4 TBX6 |
139 | 16 | 52772129 | 54846383 | 3 | 3 | 1.0e-38 | 8.0e-155 | 7.1e-77 | 51 | AKTIP FTO |
140 | 16 | 68764512 | 72845749 | 17 | 5 | 2.6e-17 | 1.6e-16 | 2.7e-06 | 68 | DHX38 NQO1 PHLPP2 RP11-296I10.3 TMED6 |
141 | 16 | 88934149 | 90172696 | 2 | 1 | 1.4e-07 | 2.5e-07 | 3.3e-06 | 18 | RPL13 |
142 | 17 | 1517914 | 2918626 | 2 | 2 | 3.1e-10 | 1.0e-19 | 5.5e-14 | 32 | SGSM2 SRR |
143 | 17 | 4137919 | 6068117 | 8 | 2 | 1.3e-09 | 6.6e-08 | 4.0e-01 | 98 | AC012146.7 RABEP1 |
144 | 17 | 6907070 | 7410212 | 1 | 1 | 2.1e-08 | 1.2e-09 | 1.7e-03 | 73 | C17orf81 |
145 | 17 | 15149905 | 16576609 | 1 | 1 | 1.0e-07 | 1.1e-06 | 3.7e-01 | 97 | ADORA2B |
146 | 17 | 34146026 | 35675511 | 6 | 1 | 1.2e-14 | 1.6e-13 | 3.8e-01 | 99 | ZNHIT3 |
147 | 17 | 39993748 | 42998534 | 18 | 3 | 9.3e-11 | 2.6e-11 | 4.2e-01 | 98 | C17orf65 RND2 TUBG2 |
148 | 17 | 43871147 | 43913030 | 1 | 1 | 8.6e-08 | 1.0e-03 | 1.8e-02 | 48 | KANSL1 |
149 | 17 | 44788310 | 47718188 | 12 | 5 | 8.5e-12 | 9.8e-14 | 1.5e-04 | 74 | ARL17A CDK5RAP3 SNF8 UBE2Z |
150 | 17 | 65123352 | 66885526 | 7 | 1 | 6.4e-18 | 2.0e-18 | 1.0e+00 | 100 | C17orf58 |
151 | 17 | 73204137 | 74588633 | 2 | 1 | 1.1e-07 | 2.2e-07 | 5.5e-01 | 99 | RP11-552F3.10 |
152 | 17 | 77821891 | 79697383 | 3 | 2 | 5.3e-13 | 1.0e-12 | 8.8e-01 | 100 | BAIAP2 RPTOR |
153 | 18 | 20082830 | 21863589 | 5 | 1 | 8.4e-20 | 6.0e-19 | 1.0e+00 | 100 | NPC1 |
154 | 18 | 38837001 | 40365619 | 1 | 2 | 4.2e-08 | 1.1e-09 | 1.0e+00 | 100 | PIK3C3 |
155 | 18 | 57349900 | 58729694 | 1 | 1 | 1.2e-20 | 8.9e-72 | 2.4e-53 | 26 | MC4R |
156 | 19 | 1127720 | 2560423 | 4 | 2 | 3.3e-12 | 1.0e-11 | 8.1e-02 | 93 | ATP8B3 REXO1 |
157 | 19 | 3391883 | 4821612 | 1 | 1 | 1.1e-07 | 4.3e-09 | 2.8e-03 | 74 | MAP2K2 |
158 | 19 | 17512412 | 19190906 | 9 | 4 | 6.9e-16 | 1.1e-16 | 1.0e+00 | 100 | AC068499.10 CRTC1 JUND MAST3 |
159 | 19 | 29606361 | 31013761 | 1 | 1 | 2.6e-19 | 8.4e-20 | 2.2e-02 | 94 | CCNE1 |
160 | 19 | 32209988 | 34959979 | 4 | 2 | 2.3e-15 | 2.8e-14 | 1.4e-01 | 96 | DPY19L3 PEPD |
161 | 19 | 38784917 | 40221643 | 2 | 1 | 1.9e-07 | 1.0e-05 | 8.7e-06 | -1 | FBXO27 |
162 | 19 | 46923752 | 48406374 | 1 | 1 | 1.3e-08 | 1.9e-23 | 1.3e-18 | 22 | SAE1 |
163 | 19 | 48931222 | 50349958 | 1 | 1 | 9.5e-08 | 2.3e-07 | 4.7e-01 | 98 | PPFIA3 |
164 | 20 | 24230055 | 26182690 | 7 | 5 | 1.5e-13 | 4.8e-10 | NaN | NaN | ABHD12 ENTPD6 NINL PYGB |
165 | 20 | 31981432 | 35512648 | 10 | 3 | 2.9e-10 | 7.7e-11 | 1.3e-02 | 86 | EIF2S2 EPB41L1 GGT7 |
166 | 20 | 42816319 | 44279989 | 2 | 1 | 9.1e-10 | 3.5e-09 | 1.0e+00 | 100 | YWHAB |
167 | 20 | 49975801 | 52810143 | 2 | 1 | 7.0e-13 | 3.6e-15 | 8.5e-05 | 75 | ZFP64 |
168 | 20 | 61667526 | 62912463 | 1 | 1 | 2.8e-08 | 4.8e-08 | 1.0e+00 | 100 | LIME1 |
169 | 21 | 45583922 | 47343320 | 3 | 3 | 2.3e-08 | 1.6e-12 | 2.9e-02 | 90 | ADARB1 C21orf122 PTTG1IP |
170 | 22 | 17414103 | 18655860 | 2 | 1 | 2.5e-08 | 9.4e-09 | 8.1e-02 | 91 | BCL2L13 |
171 | 22 | 37643564 | 39663066 | 7 | 1 | 1.4e-10 | 8.3e-10 | 1.5e-02 | 84 | PLA2G6 |
172 | 22 | 40500313 | 41004384 | 1 | 1 | 1.6e-07 | 9.0e-08 | 2.5e-02 | 82 | ADSL |
173 | 22 | 41181586 | 42614362 | 1 | 1 | 6.1e-08 | 8.4e-09 | 1.7e-03 | 70 | ACO2 |
Trait | chisq ratio | # genes+ | # genes++ | % genes++ | corr | corr P | genes |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|
study | tissue | # hits | % hits/tests | avg chisq |
---|---|---|---|---|
GTEx | Ovary | 28 | 3.1 | 5.2 |
GTEx | Vagina | 16 | 2.5 | 5.2 |
GTEx | Prostate | 21 | 2.5 | 5.0 |
GTEx | Small Intestine Terminal Ileum | 10 | 2.2 | 4.9 |
GTEx | Brain Cerebellar Hemisphere | 40 | 2.7 | 4.8 |
GTEx | Stomach | 35 | 2.4 | 4.8 |
GTEx | Artery Tibial | 81 | 2.2 | 4.7 |
GTEx | Brain Cortex | 24 | 2.3 | 4.7 |
GTEx | Spleen | 33 | 2.3 | 4.7 |
GTEx | Whole Blood | 48 | 2.4 | 4.7 |
ROSMAP | Brain Pre-frontal Cortex | 121 | 2.8 | 4.7 |
GTEx | Adipose Visceral Omentum | 48 | 2.4 | 4.6 |
GTEx | Artery Aorta | 70 | 2.4 | 4.6 |
GTEx | Brain Cerebellum | 50 | 2.5 | 4.6 |
GTEx | Breast Mammary Tissue | 51 | 2.6 | 4.6 |
GTEx | Esophagus Gastroesophageal Junction | 40 | 2.8 | 4.6 |
GTEx | Liver | 20 | 2.8 | 4.6 |
GTEx | Skin Not Sun Exposed Suprapubic | 56 | 2.3 | 4.6 |
GTEx | Uterus | 17 | 3.0 | 4.6 |
GTEx | Adipose Subcutaneous | 77 | 2.2 | 4.5 |
GTEx | Brain Caudate basal ganglia | 24 | 2.6 | 4.5 |
GTEx | Brain Putamen basal ganglia | 12 | 1.9 | 4.5 |
GTEx | Cells EBV-transformed lymphocytes | 26 | 1.8 | 4.5 |
GTEx | Esophagus Muscularis | 88 | 2.7 | 4.5 |
GTEx | Heart Left Ventricle | 43 | 2.8 | 4.5 |
GTEx | Lung | 64 | 2.2 | 4.5 |
GTEx | Skin Sun Exposed Lower leg | 86 | 2.4 | 4.5 |
GTEx | Brain Frontal Cortex BA9 | 23 | 2.5 | 4.4 |
GTEx | Colon Transverse | 47 | 2.3 | 4.4 |
GTEx | Esophagus Mucosa | 78 | 2.3 | 4.4 |
GTEx | Heart Atrial Appendage | 37 | 2.3 | 4.4 |
GTEx | Pituitary | 22 | 2.0 | 4.4 |
GTEx | Brain Nucleus accumbens basal ganglia | 22 | 2.5 | 4.3 |
GTEx | Breast Mammary Tissue (Female) | 33 | 2.0 | 4.3 |
GTEx | Cells Transformed fibroblasts | 102 | 2.4 | 4.3 |
GTEx | Muscle Skeletal | 70 | 2.4 | 4.3 |
GTEx | Nerve Tibial | 92 | 2.1 | 4.3 |
GTEx | Adrenal Gland | 33 | 2.3 | 4.2 |
GTEx | Artery Coronary | 22 | 1.9 | 4.2 |
GTEx | Pancreas | 35 | 2.1 | 4.2 |
The Cancer Genome Atlas | Esophageal Carcinoma | 16 | 2.3 | 4.2 |
The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | 24 | 2.2 | 4.2 |
GTEx | Breast Mammary Tissue (Male) | 22 | 1.8 | 4.1 |
GTEx | Thyroid | 90 | 2.3 | 4.1 |
The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | 22 | 2.0 | 4.1 |
The Cancer Genome Atlas | Glioblastoma Multiforme | 22 | 2.2 | 4.1 |
The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | 9 | 1.8 | 4.1 |
GTEx | Colon Sigmoid | 25 | 1.7 | 4.0 |
GTEx | Testis | 57 | 1.8 | 4.0 |
The Cancer Genome Atlas | Colon Adenocarcinoma | 45 | 2.2 | 4.0 |
GTEx | Brain Hypothalamus | 8 | 1.4 | 3.9 |
The Cancer Genome Atlas | Brain Lower Grade Glioma | 96 | 2.2 | 3.9 |
The Cancer Genome Atlas | Soft Tissue Sarcoma | 19 | 1.8 | 3.9 |
METSIM | Adipose | 83 | 1.8 | 3.8 |
CommonMind | Brain Pre-frontal Cortex | 96 | 1.8 | 3.8 |
The Cancer Genome Atlas | Bladder Urothelial Carcinoma | 28 | 1.7 | 3.8 |
The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | 47 | 1.7 | 3.8 |
The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | 25 | 1.6 | 3.8 |
The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | 22 | 1.7 | 3.8 |
The Cancer Genome Atlas | Stomach Adenocarcinoma | 24 | 1.4 | 3.8 |
The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | 66 | 1.6 | 3.7 |
The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | 32 | 1.6 | 3.7 |
The Cancer Genome Atlas | Lung Adenocarcinoma | 51 | 1.7 | 3.7 |
The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | 41 | 1.6 | 3.7 |
The Cancer Genome Atlas | Pancreatic Adenocarcinoma | 25 | 1.5 | 3.7 |
The Cancer Genome Atlas | Skin Cutaneous Melanoma | 9 | 1.7 | 3.7 |
NTR | Blood | 37 | 1.5 | 3.6 |
The Cancer Genome Atlas | Breast Invasive Carcinoma | 65 | 1.5 | 3.6 |
The Cancer Genome Atlas | Prostate Adenocarcinoma | 72 | 1.6 | 3.6 |
The Cancer Genome Atlas | Testicular Germ Cell Tumors | 23 | 1.8 | 3.6 |
The Cancer Genome Atlas | Thyroid Carcinoma | 76 | 1.5 | 3.6 |
GTEx | Brain Hippocampus | 8 | 1.5 | 3.5 |
YFS | Blood | 68 | 1.5 | 3.5 |
The Cancer Genome Atlas | Rectum Adenocarcinoma | 7 | 1.0 | 3.1 |