Best TWAS P=9.61e-09 · Best GWAS P=9.69e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Nerve Tibial | CTNNB1 | 0.05 | 0.00 | enet | 4 | 0.00 | 2.0e-01 | 5.7 | 5.7 | 9.6e-09 | 0.98 | 0.02 | 0.88 | TRUE |
2 | NTR | Blood | CTNNB1 | 0.04 | 0.04 | lasso | 6 | 0.04 | 4.6e-13 | 5.3 | -5.6 | 2.7e-08 | -0.78 | 0.04 | 0.96 | FALSE |