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Traits
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Arm fat-free mass (right)
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chr9:102,162,230-103,803,109
Best TWAS P=6.66e-11 · Best GWAS P=5.79e-11 conditioned to 1
102.2M
102.4M
102.6M
102.8M
103M
103.2M
103.4M
103.6M
103.8M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
GTEx
Skin Sun Exposed Lower leg
TEX10
0.27
0.27
lasso
8
0.28
7.0e-23
6.5
6.5
6.7e-11
1.00
0.01
0.99
TRUE
4
The Cancer Genome Atlas
Cervical Squamous Cell Carcinoma
INVS
0.10
0.03
blup
107
0.07
4.0e-04
6.3
5.6
1.8e-08
0.89
0.01
0.96
FALSE
1
GTEx
Skin Not Sun Exposed Suprapubic
TEX10
0.10
0.09
lasso
4
0.10
3.1e-06
4.2
5.5
3.3e-08
0.92
0.02
0.98
FALSE
5
The Cancer Genome Atlas
Pancreatic Adenocarcinoma
INVS
0.16
0.12
enet
8
0.08
2.8e-04
5.3
5.4
5.8e-08
0.77
0.26
0.63
FALSE
2
GTEx
Skin Sun Exposed Lower leg
INVS
0.19
0.06
enet
30
0.11
1.5e-09
5.3
5.2
1.8e-07
0.79
0.02
0.98
FALSE