Best TWAS P=8.47e-08 · Best GWAS P=1.6e-08 conditioned to 0.000753
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SMG6 | 0.03 | 0.01 | blup | 144 | 0.01 | 0.00478 | 3.8 | 5.4 | 8.5e-08 | -0.52 | 0.12 | 0.47 | TRUE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SMG6 | 0.08 | 0.05 | blup | 144 | 0.07 | 0.00013 | 4.6 | 5.2 | 2.6e-07 | -0.53 | 0.36 | 0.42 | FALSE |