Best TWAS P=3.63e-08 · Best GWAS P=2.9e-09 conditioned to 0.00164
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Testis | SNX13 | 0.21 | 0.14 | enet | 15 | 0.13 | 2.0e-06 | -4.9 | 5.2 | 2.6e-07 | 0.78 | 0.27 | 0.73 | FALSE |
| 2 | The Cancer Genome Atlas | Colon Adenocarcinoma | SNX13 | 0.15 | 0.16 | lasso | 3 | 0.18 | 1.7e-10 | 5.4 | -5.5 | 3.6e-08 | -0.64 | 0.04 | 0.96 | TRUE |