TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Arm fat percentage (left)
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chr16:52,828,325-54,846,383
Best TWAS P=1.17e-30 · Best GWAS P=2.41e-124 conditioned to 2.87e-65
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Testis
AKTIP
0.19
0.00
enet
26
0.00
1.9e-01
0.66
11.5
1.2e-30
0.51
0.03
0.40
TRUE
1
CommonMind
Brain Pre-frontal Cortex
FTO
0.11
0.00
bslmm
739
0.02
1.6e-03
-2.02
10.4
1.9e-25
0.38
0.09
0.55
TRUE
3
The Cancer Genome Atlas
Glioblastoma Multiforme
FTO
0.27
0.16
enet
13
0.14
6.7e-05
-1.90
9.1
8.8e-20
0.33
0.11
0.32
TRUE