[Hub]/) : Traits : Arm fat percentage (left) : ← →

chr17:44,788,310-47,718,188

Best TWAS P=2.17e-12 · Best GWAS P=3.55e-16 conditioned to 0.698

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	ATP5G1	0.07	0.05	lasso	3	0.06	4.7e-08	-5.90	6.1	1.4e-09	-0.62	0.94	0.06	FALSE
2	CommonMind	Brain Pre-frontal Cortex	SNF8	0.08	0.07	lasso	5	0.08	9.3e-10	-5.46	7.0	2.2e-12	-0.84	0.08	0.92	TRUE
3	GTEx	Artery Aorta	SNF8	0.12	0.12	lasso	6	0.10	2.3e-06	-5.31	5.3	9.2e-08	-0.63	0.67	0.23	FALSE
4	GTEx	Artery Aorta	AC091133.1	0.10	0.07	lasso	5	0.07	1.2e-04	-5.31	5.6	2.3e-08	-0.65	0.29	0.49	FALSE
5	GTEx	Artery Aorta	RP11-6N17.9	0.23	0.12	enet	19	0.19	9.5e-11	-4.55	-5.1	2.7e-07	0.09	0.98	0.02	FALSE
6	GTEx	Artery Aorta	RP11-6N17.10	0.20	0.07	enet	24	0.14	3.5e-08	-4.55	-5.5	5.0e-08	0.11	0.46	0.17	FALSE
7	GTEx	Brain Caudate basal ganglia	RP11-6N17.9	0.45	-0.01	enet	28	0.16	3.3e-05	-0.68	-5.5	5.1e-08	0.09	0.06	0.14	FALSE
8	GTEx	Brain Cerebellar Hemisphere	CDK5RAP3	0.22	0.10	lasso	6	0.09	2.6e-03	4.56	-5.5	3.7e-08	0.09	0.08	0.41	FALSE
9	GTEx	Brain Cerebellar Hemisphere	RP11-6N17.10	0.21	0.16	lasso	5	0.13	3.8e-04	4.56	-5.2	2.0e-07	0.09	0.09	0.44	FALSE
10	GTEx	Brain Cortex	ARL17A	0.35	0.20	lasso	6	0.25	1.7e-07	4.93	5.9	3.2e-09	0.01	0.00	0.92	FALSE
11	GTEx	Brain Nucleus accumbens basal ganglia	CDK5RAP3	0.21	0.04	lasso	4	0.02	7.2e-02	5.44	-5.3	9.4e-08	0.08	0.08	0.39	FALSE
12	GTEx	Cells Transformed fibroblasts	SNF8	0.12	0.10	lasso	3	0.12	5.1e-09	-5.30	5.8	7.5e-09	-0.66	0.99	0.01	FALSE
13	GTEx	Cells Transformed fibroblasts	AC091133.1	0.14	0.07	enet	22	0.09	1.9e-07	-5.08	5.2	2.4e-07	-0.60	0.89	0.08	FALSE
14	GTEx	Esophagus Gastroesophageal Junction	CDK5RAP3	0.21	0.09	lasso	6	0.07	1.2e-03	-4.55	-5.4	6.8e-08	0.10	0.09	0.50	FALSE
15	GTEx	Esophagus Gastroesophageal Junction	RP11-6N17.9	0.18	0.14	lasso	3	0.09	4.9e-04	-4.55	-5.7	1.2e-08	0.12	0.03	0.73	FALSE
16	GTEx	Esophagus Muscularis	COPZ2	0.14	0.04	lasso	5	0.06	1.3e-04	3.79	5.2	1.6e-07	-0.05	0.18	0.04	FALSE
17	GTEx	Esophagus Muscularis	SNF8	0.08	0.03	lasso	3	0.01	5.7e-02	-6.27	6.2	7.5e-10	-0.71	0.03	0.77	FALSE
18	GTEx	Heart Atrial Appendage	CDK5RAP3	0.13	0.00	enet	18	0.04	5.1e-03	1.11	-5.4	8.3e-08	0.10	0.09	0.05	FALSE
19	GTEx	Heart Atrial Appendage	ATP5G1	0.22	0.10	enet	6	0.13	1.3e-06	-5.30	5.3	1.2e-07	-0.62	0.95	0.01	TRUE
20	GTEx	Heart Left Ventricle	ATP5G1	0.24	0.22	lasso	4	0.22	9.3e-12	-5.81	6.3	2.6e-10	-0.64	1.00	0.00	FALSE
21	GTEx	Liver	ARL17A	0.34	0.18	lasso	9	0.18	9.8e-06	4.93	6.0	2.3e-09	0.04	0.00	0.86	TRUE
22	GTEx	Muscle Skeletal	ATP5G1	0.13	0.08	enet	18	0.07	5.1e-07	-5.08	5.2	1.5e-07	-0.67	0.92	0.08	FALSE
23	GTEx	Muscle Skeletal	UBE2Z	0.06	0.02	lasso	8	0.03	9.8e-04	-5.81	5.8	6.8e-09	-0.66	0.42	0.46	FALSE
24	GTEx	Muscle Skeletal	AC003665.1	0.05	0.03	enet	8	0.03	1.4e-03	4.82	6.1	9.7e-10	-0.11	0.12	0.73	FALSE
25	GTEx	Nerve Tibial	CDK5RAP3	0.41	0.35	enet	23	0.36	6.1e-27	-4.55	-5.4	7.5e-08	0.12	0.98	0.02	FALSE
26	GTEx	Nerve Tibial	UBE2Z	0.12	0.04	enet	16	0.05	1.5e-04	-5.31	5.4	5.2e-08	-0.60	0.89	0.01	FALSE
27	GTEx	Nerve Tibial	RP11-6N17.10	0.28	0.19	lasso	8	0.19	1.6e-13	-4.55	-5.3	1.1e-07	0.12	0.98	0.02	FALSE
28	GTEx	Ovary	ATP5G1	0.15	0.08	enet	13	0.09	2.8e-03	-4.88	6.1	9.6e-10	-0.66	0.06	0.72	FALSE
29	GTEx	Pancreas	CDK5RAP3	0.11	-0.01	lasso	4	0.02	5.1e-02	4.56	-6.2	7.2e-10	0.04	0.09	0.18	FALSE
30	GTEx	Pancreas	RP11-6N17.9	0.15	0.04	lasso	5	0.04	9.3e-03	-2.56	-5.8	5.5e-09	0.07	0.13	0.17	FALSE
31	GTEx	Skin Not Sun Exposed Suprapubic	UBE2Z	0.11	0.07	lasso	6	0.04	1.8e-03	-6.27	6.3	2.8e-10	-0.68	0.10	0.12	FALSE
32	GTEx	Skin Sun Exposed Lower leg	UBE2Z	0.14	0.11	lasso	9	0.14	6.3e-12	-4.94	5.8	9.1e-09	-0.64	1.00	0.00	FALSE
33	GTEx	Stomach	RP11-6N17.9	0.13	0.02	lasso	6	0.04	8.0e-03	4.87	-5.6	2.1e-08	0.06	0.11	0.69	FALSE
34	GTEx	Testis	SNF8	0.23	0.11	lasso	5	0.08	1.6e-04	-5.31	5.3	1.4e-07	-0.62	0.68	0.08	FALSE
35	GTEx	Testis	RP11-6N17.4	0.14	0.02	lasso	10	0.02	4.8e-02	5.51	5.6	2.6e-08	-0.07	0.15	0.70	FALSE
36	GTEx	Thyroid	CDK5RAP3	0.21	0.14	lasso	5	0.18	1.6e-13	-4.55	-5.7	1.6e-08	0.13	0.98	0.02	FALSE
37	GTEx	Thyroid	SNF8	0.11	0.08	lasso	3	0.07	2.5e-06	-5.08	5.5	4.8e-08	-0.61	0.89	0.08	FALSE
38	GTEx	Thyroid	RP11-6N17.9	0.22	0.14	lasso	5	0.14	5.2e-11	-4.55	-5.5	3.1e-08	0.12	0.98	0.02	FALSE
39	GTEx	Thyroid	RP11-6N17.10	0.19	0.12	lasso	5	0.13	3.0e-10	-4.55	-5.9	4.2e-09	0.13	0.98	0.02	FALSE
40	The Cancer Genome Atlas	Brain Lower Grade Glioma	ATP5G1	0.08	0.02	enet	7	0.02	3.1e-03	-5.75	5.2	1.5e-07	-0.59	0.02	0.79	FALSE
41	The Cancer Genome Atlas	Brain Lower Grade Glioma	SNF8	0.11	0.12	lasso	4	0.12	1.4e-13	-5.48	5.6	1.7e-08	-0.65	0.38	0.62	FALSE
42	The Cancer Genome Atlas	Prostate Adenocarcinoma	CBX1	0.03	0.04	lasso	4	0.04	3.7e-05	5.55	-5.4	7.3e-08	0.07	0.01	0.99	FALSE
43	The Cancer Genome Atlas	Prostate Adenocarcinoma	CDK5RAP3	0.06	0.00	blup	62	0.03	1.0e-03	-3.93	-6.8	7.7e-12	0.07	0.01	0.44	TRUE
44	The Cancer Genome Atlas	Prostate Adenocarcinoma	SNF8	0.05	0.06	blup	47	0.06	1.0e-06	-6.27	5.4	7.7e-08	-0.64	0.04	0.96	FALSE
45	The Cancer Genome Atlas	Thyroid Carcinoma	SNF8	0.16	0.18	lasso	7	0.18	5.9e-17	-5.31	5.4	8.0e-08	-0.64	0.34	0.66	FALSE
46	The Cancer Genome Atlas	Thyroid Carcinoma	UBE2Z	0.13	0.09	lasso	4	0.12	2.7e-11	-5.31	5.9	4.8e-09	-0.64	0.04	0.96	FALSE