[Hub]/) : Traits : Arm fat percentage (left) :

chr2:68,850,921-70,593,838

Best TWAS P=4.27e-10 · Best GWAS P=1.59e-08 conditioned to 0.83

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Artery Tibial GFPT1 0.09 0.05 lasso 4 0.02 1.1e-02 -5.6 5.6 1.9e-08 -0.97 0.02 0.98 FALSE
2 GTEx Cells Transformed fibroblasts AAK1 0.08 0.05 lasso 5 0.03 1.4e-03 -5.5 -5.6 2.1e-08 0.93 0.02 0.97 FALSE
3 GTEx Muscle Skeletal GFPT1 0.08 0.00 lasso 8 0.00 2.2e-01 -5.5 5.2 2.4e-07 -0.85 0.03 0.95 FALSE
4 GTEx Nerve Tibial GFPT1 0.13 0.01 lasso 4 0.02 1.8e-02 -5.5 6.2 4.3e-10 -0.89 0.02 0.91 TRUE
5 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma GFPT1 0.05 0.00 blup 67 0.02 5.9e-03 -5.5 5.9 4.5e-09 -0.89 0.01 0.77 FALSE
6 The Cancer Genome Atlas Brain Lower Grade Glioma GFPT1 0.12 0.05 blup 67 0.04 3.9e-05 -5.5 5.5 3.0e-08 -0.93 0.01 0.99 FALSE