Best TWAS P=1.01e-07 · Best GWAS P=3.82e-08 conditioned to 0.118
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Esophagus Muscularis | AC015971.2 | 0.09 | 0.03 | lasso | 6 | 0.05 | 0.00091 | 5.5 | -5.3 | 1.0e-07 | -0.92 | 0.01 | 0.95 | TRUE |
| 2 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | RNF103 | 0.06 | 0.02 | blup | 42 | 0.02 | 0.02420 | -4.2 | 5.1 | 2.7e-07 | 0.84 | 0.02 | 0.44 | FALSE |