Best TWAS P=1.85e-08 · Best GWAS P=2.71e-08 conditioned to 0.381
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | LOC100129961 | 0.17 | 0.14 | enet | 9 | 0.14 | 2.6e-17 | 5.5 | 5.6 | 1.9e-08 | 0.93 | 0.01 | 0.99 | TRUE |
| 2 | GTEx | Testis | AC016725.4 | 0.18 | 0.09 | lasso | 6 | 0.09 | 6.3e-05 | 5.5 | -5.4 | 8.1e-08 | -0.94 | 0.02 | 0.97 | FALSE |
| 3 | NTR | Blood | CCNT2 | 0.01 | 0.00 | blup | 370 | 0.00 | 6.7e-02 | -4.6 | -5.3 | 1.1e-07 | -0.68 | 0.15 | 0.42 | FALSE |