Best TWAS P=3.83e-09 · Best GWAS P=8.44e-19 conditioned to 5.28e-13
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Liver | SRR | 0.31 | 0.00 | lasso | 7 | 0.00 | 0.30 | -6.5 | 5.9 | 3.8e-09 | -0.36 | 0.06 | 0.14 | TRUE |
| 2 | The Cancer Genome Atlas | Testicular Germ Cell Tumors | SGSM2 | 0.13 | 0.01 | blup | 81 | 0.01 | 0.11 | 4.4 | -5.4 | 8.7e-08 | 0.07 | 0.01 | 0.51 | FALSE |