Best TWAS P=9.26e-08 · Best GWAS P=3.35e-08 conditioned to 0.00658
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Lung Adenocarcinoma | ADSL | 0.03 | 0 | blup | 33 | 0.01 | 0.0089 | -4.7 | -5.3 | 9.5e-08 | -0.72 | 0.01 | 0.50 | FALSE |
2 | The Cancer Genome Atlas | Stomach Adenocarcinoma | ADSL | 0.04 | 0 | blup | 33 | 0.03 | 0.0026 | -3.5 | -5.3 | 9.3e-08 | -0.65 | 0.02 | 0.64 | TRUE |