Best TWAS P=1.29e-08 · Best GWAS P=9.9e-12 conditioned to 0.000154
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | PKHD1 | 0.04 | 0.05 | lasso | 3 | 0.05 | 1.7e-06 | 5.4 | -5.7 | 1.3e-08 | -0.78 | 0.37 | 0.62 | TRUE |