[Hub]/) : Traits : Arm fat-free mass (left) : ← →

chr1:40,748,755-42,542,658

Best TWAS P=1.21e-35 · Best GWAS P=9.05e-28 conditioned to 0.0164

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
15	The Cancer Genome Atlas	Thyroid Carcinoma	SCMH1	0.07	0.08	blup	97	0.07	2.5e-07	10.621	-12.5	1.2e-35	-0.75	0.05	0.95	TRUE
13	The Cancer Genome Atlas	Prostate Adenocarcinoma	SCMH1	0.03	0.03	lasso	2	0.02	6.2e-03	10.921	-10.9	9.1e-28	-1.00	0.01	0.95	FALSE
7	GTEx	Nerve Tibial	SCMH1	0.16	0.03	enet	24	0.07	1.6e-05	10.748	-10.0	1.5e-23	-0.70	0.02	0.97	FALSE
6	GTEx	Lung	CTPS1	0.06	0.04	lasso	3	0.04	2.4e-04	8.914	9.2	5.2e-20	0.77	0.21	0.63	FALSE
1	GTEx	Artery Aorta	CTPS1	0.10	0.00	enet	8	0.00	4.6e-01	8.399	8.8	1.3e-18	0.75	0.05	0.57	FALSE
5	GTEx	Cells EBV-transformed lymphocytes	CTPS1	0.26	0.11	lasso	6	0.08	1.6e-03	8.640	8.1	4.0e-16	0.70	0.20	0.34	FALSE
8	GTEx	Testis	SLFNL1	0.30	0.17	lasso	14	0.28	5.3e-13	10.789	7.8	4.0e-15	0.85	0.01	0.99	FALSE
12	The Cancer Genome Atlas	Brain Lower Grade Glioma	SCMH1	0.04	0.01	enet	7	0.02	2.5e-03	-0.004	-7.7	1.4e-14	-0.70	0.01	0.79	FALSE
4	GTEx	Breast Mammary Tissue (Female)	CTPS1	0.12	-0.01	lasso	4	-0.01	7.5e-01	7.348	6.7	2.7e-11	0.61	0.04	0.10	FALSE
2	GTEx	Artery Coronary	CTPS1	0.25	-0.01	enet	23	0.00	3.0e-01	0.092	6.0	2.6e-09	0.39	0.07	0.14	FALSE
11	The Cancer Genome Atlas	Breast Invasive Carcinoma	SLFNL1	0.03	0.01	enet	6	0.02	5.6e-05	-1.200	5.9	3.8e-09	0.58	0.12	0.71	FALSE
14	The Cancer Genome Atlas	Testicular Germ Cell Tumors	SCMH1	0.35	0.14	blup	96	0.14	1.5e-05	-4.433	5.8	8.4e-09	0.47	0.18	0.24	FALSE
3	GTEx	Brain Cerebellum	FOXO6	0.35	0.33	enet	21	0.36	1.2e-11	3.602	5.7	1.4e-08	-0.01	0.96	0.04	FALSE
9	GTEx	Testis	CTPS1	0.57	0.28	enet	17	0.38	1.0e-17	-3.077	5.3	8.6e-08	0.48	0.98	0.02	FALSE
10	ROSMAP	Brain Pre-frontal Cortex	CTPS1	0.04	0.04	enet	7	0.04	9.1e-06	7.361	5.3	1.0e-07	0.59	0.61	0.14	FALSE