Best TWAS P=1.95e-19 · Best GWAS P=3.05e-21 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Subcutaneous | GPR126 | 0.06 | 0.04 | lasso | 4 | 0.04 | 0.00061 | -8.8 | 9.0 | 1.9e-19 | -0.97 | 0.02 | 0.96 | TRUE |
| 2 | METSIM | Adipose | GPR126 | 0.05 | 0.01 | blup | 429 | 0.02 | 0.00019 | -4.4 | 6.5 | 9.6e-11 | -0.74 | 0.11 | 0.89 | FALSE |
| 3 | NTR | Blood | HIVEP2 | 0.02 | 0.01 | blup | 424 | 0.01 | 0.00262 | -3.0 | -5.2 | 1.7e-07 | 0.40 | 0.34 | 0.05 | FALSE |
| 4 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | VTA1 | 0.03 | 0.02 | blup | 66 | 0.02 | 0.00170 | 5.2 | -5.1 | 2.7e-07 | 0.09 | 0.11 | 0.55 | FALSE |
| 5 | The Cancer Genome Atlas | Uterine Corpus Endometrial Carcinoma | NMBR | 0.09 | 0.01 | blup | 46 | 0.04 | 0.03380 | 4.0 | -5.5 | 3.2e-08 | 0.12 | 0.02 | 0.65 | TRUE |