Best TWAS P=6.93e-15 · Best GWAS P=1.56e-23 conditioned to 3.66e-10
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Breast Mammary Tissue (Female) | CERS5 | 0.09 | 0.03 | lasso | 3 | 0.05 | 0.01750 | -0.4 | -5.2 | 1.5e-07 | -0.53 | 0.05 | 0.22 | FALSE |
2 | GTEx | Testis | FAIM2 | 0.27 | 0.09 | lasso | 5 | 0.06 | 0.00093 | 8.2 | -7.8 | 6.9e-15 | -0.77 | 0.05 | 0.84 | TRUE |