Best TWAS P=2.77e-08 · Best GWAS P=1.77e-13 conditioned to 1.82e-12
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Visceral Omentum | RPL9P25 | 0.26 | 0.02 | enet | 27 | 0.07 | 1.3e-04 | -2.8 | -5.6 | 2.8e-08 | -0.10 | 0.72 | 0.02 | TRUE |
| 2 | GTEx | Colon Transverse | IQCH-AS1 | 0.24 | 0.01 | enet | 31 | 0.08 | 1.5e-04 | -6.6 | -5.2 | 2.2e-07 | 0.03 | 0.03 | 0.92 | TRUE |
| 3 | GTEx | Muscle Skeletal | MAP2K5 | 0.08 | 0.03 | lasso | 6 | 0.05 | 1.9e-05 | 4.4 | 5.4 | 7.5e-08 | -0.02 | 0.01 | 0.99 | TRUE |
| 4 | The Cancer Genome Atlas | Soft Tissue Sarcoma | LBXCOR1 | 0.07 | 0.03 | blup | 57 | 0.03 | 6.3e-03 | -5.5 | 5.4 | 8.0e-08 | -0.01 | 0.02 | 0.48 | FALSE |