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Traits
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Traits
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Arm fat-free mass (left)
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chr20:46,840,115-48,591,758
Best TWAS P=2.74e-08 · Best GWAS P=9.09e-08 conditioned to 1
46.8M
47M
47.2M
47.4M
47.6M
47.8M
48M
48.2M
48.4M
48.6M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
METSIM
Adipose
ARFGEF2
0.04
0.03
lasso
12
0.02
9.8e-05
5.3
-5.6
2.7e-08
-0.96
0.02
0.98
TRUE
2
NTR
Blood
SNORD12B
0.03
0.05
lasso
8
0.05
1.9e-14
5.3
-5.5
4.6e-08
-0.98
0.01
0.99
FALSE
3
The Cancer Genome Atlas
Brain Lower Grade Glioma
ARFGEF2
0.05
0.04
lasso
5
0.05
3.2e-06
5.0
-5.3
9.1e-08
-0.87
0.01
0.99
FALSE
4
The Cancer Genome Atlas
Ovarian Serous Cystadenocarcinoma
C20orf199
0.05
0.06
lasso
4
0.06
1.0e-04
5.3
5.3
1.0e-07
1.00
0.00
0.96
FALSE