Best TWAS P=4.13e-08 · Best GWAS P=3.62e-06 conditioned to 0.00195
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | APOC1P1 | 0.05 | 0.03 | blup | 37 | 0.03 | 5.2e-04 | 2.1 | -5.5 | 4.1e-08 | 0.31 | 0.02 | 0.02 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | APOC4 | 0.06 | 0.03 | blup | 34 | 0.04 | 8.4e-06 | -4.4 | -5.4 | 6.3e-08 | 0.07 | 0.01 | 0.84 | FALSE |