Best TWAS P=2.76e-09 · Best GWAS P=7.79e-08 conditioned to 0.535
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | NTR | Blood | FAM160A1 | 0.03 | 0.02 | enet | 26 | 0.02 | 1.4e-07 | -5.3 | 6.0 | 2.8e-09 | -0.94 | 0.02 | 0.98 | TRUE |
2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | FAM160A1 | 0.04 | 0.02 | blup | 99 | 0.02 | 1.2e-05 | 5.0 | 5.3 | 1.0e-07 | -0.91 | 0.03 | 0.96 | FALSE |