Best TWAS P=6.12e-08 · Best GWAS P=1.9e-08 conditioned to 0.0137
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Colon Adenocarcinoma | CCDC55 | 0.15 | 0.01 | blup | 64 | 0.04 | 0.0019 | -4.8 | 5.4 | 6.1e-08 | 0.72 | 0.02 | 0.52 | TRUE |
| 2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | EFCAB5 | 0.04 | 0.03 | enet | 10 | 0.02 | 0.0060 | -4.5 | -5.2 | 2.3e-07 | -0.68 | 0.04 | 0.88 | FALSE |