Best TWAS P=1.53e-07 · Best GWAS P=7.58e-07 conditioned to 0.786
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Esophagus Mucosa | RP11-415F23.2 | 0.27 | 0.09 | lasso | 4 | 0.09 | 8.6e-07 | 4.8 | 5.2 | 1.5e-07 | 0.92 | 0.02 | 0.97 | TRUE |
2 | GTEx | Testis | RP11-415F23.2 | 0.29 | 0.15 | lasso | 2 | 0.11 | 1.1e-05 | 4.9 | 5.1 | 3.0e-07 | 1.00 | 0.01 | 0.98 | FALSE |