Best TWAS P=2.88e-07 · Best GWAS P=1.79e-09 conditioned to 0.055
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Esophageal Carcinoma | EVX1 | 0.16 | 0.02 | blup | 50 | 0.12 | 0.00014 | -1.2 | 5.1 | 2.9e-07 | 0.74 | 0.01 | 0.41 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | HOXA9 | 0.04 | 0.04 | lasso | 2 | 0.04 | 0.00014 | 4.7 | -5.1 | 3.1e-07 | -0.19 | 0.05 | 0.90 | TRUE |