[Hub]/) : Traits : Trunk fat-free mass : ← →

chr7:1,704,673-3,581,391

Best TWAS P=1.64e-36 · Best GWAS P=1.47e-35 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
1	CommonMind	Brain Pre-frontal Cortex	AMZ1	0.19	0.12	enet	22	0.13	5.7e-16	6.1	7.7	1.0e-14	-0.43	1.00	0.00	TRUE
2	GTEx	Adipose Subcutaneous	GNA12	0.11	0.08	lasso	4	0.07	1.3e-06	-7.6	-8.4	3.6e-17	0.72	0.35	0.65	FALSE
3	GTEx	Artery Tibial	GNA12	0.24	0.13	enet	20	0.22	3.5e-17	-12.4	-10.6	2.0e-26	0.86	0.02	0.98	FALSE
4	GTEx	Breast Mammary Tissue (Male)	EIF3B	0.38	-0.01	enet	28	0.12	1.3e-03	6.5	-5.2	2.4e-07	0.06	0.04	0.06	TRUE
5	GTEx	Cells EBV-transformed lymphocytes	GNA12	0.46	0.51	lasso	5	0.50	7.9e-19	-12.3	-12.3	1.1e-34	0.90	0.02	0.98	FALSE
6	GTEx	Cells Transformed fibroblasts	GNA12	0.21	0.11	lasso	11	0.15	1.7e-11	-12.4	-9.9	2.5e-23	0.87	0.01	0.99	FALSE
7	GTEx	Colon Sigmoid	GNA12	0.14	0.05	lasso	3	0.03	3.6e-02	-7.6	-10.2	2.0e-24	0.82	0.04	0.88	FALSE
8	GTEx	Colon Transverse	GNA12	0.19	0.08	lasso	4	0.10	2.3e-05	6.5	-7.3	2.0e-13	0.62	0.21	0.77	FALSE
9	GTEx	Esophagus Gastroesophageal Junction	GNA12	0.20	0.12	lasso	6	0.12	3.4e-05	-7.6	-10.2	1.5e-24	0.82	0.05	0.93	FALSE
10	GTEx	Esophagus Mucosa	GNA12	0.16	0.13	lasso	3	0.13	3.0e-09	-12.3	-11.3	1.3e-29	0.93	0.01	0.99	FALSE
11	GTEx	Esophagus Muscularis	GNA12	0.32	0.31	lasso	3	0.34	2.1e-21	-12.4	-11.9	7.9e-33	0.93	0.01	0.99	TRUE
12	GTEx	Lung	GNA12	0.16	0.08	enet	21	0.12	1.2e-09	-12.3	-9.9	5.5e-23	0.78	0.01	0.99	FALSE
13	GTEx	Nerve Tibial	GNA12	0.31	0.34	lasso	7	0.36	9.6e-27	-7.7	-10.1	9.1e-24	0.83	0.89	0.11	FALSE
14	GTEx	Skin Not Sun Exposed Suprapubic	GNA12	0.10	0.15	lasso	3	0.12	4.2e-07	6.0	-6.6	4.3e-11	0.55	0.36	0.62	FALSE
15	GTEx	Skin Sun Exposed Lower leg	GNA12	0.17	0.16	lasso	3	0.18	1.3e-14	-7.4	-10.0	2.2e-23	0.85	0.16	0.84	FALSE
16	GTEx	Skin Sun Exposed Lower leg	AC004840.9	0.18	0.01	enet	36	0.02	3.7e-03	2.6	-5.4	6.8e-08	0.15	0.18	0.21	TRUE
17	GTEx	Small Intestine Terminal Ileum	GNA12	0.34	0.20	lasso	5	0.16	2.4e-04	-7.6	-8.3	9.5e-17	0.74	0.08	0.74	TRUE
18	GTEx	Stomach	GNA12	0.18	0.16	lasso	2	0.13	6.6e-07	-7.6	-7.7	1.7e-14	0.68	0.54	0.44	FALSE
19	GTEx	Whole Blood	GNA12	0.09	0.01	enet	4	0.00	3.3e-01	-12.0	-12.1	1.7e-33	0.90	0.02	0.90	FALSE
20	METSIM	Adipose	GNA12	0.07	0.05	lasso	3	0.05	3.3e-08	-7.6	-7.7	1.1e-14	0.75	0.37	0.63	FALSE
21	NTR	Blood	GNA12	0.07	0.03	bslmm	597	0.06	1.3e-17	-9.2	-8.9	4.3e-19	0.58	0.94	0.06	FALSE
22	ROSMAP	Brain Pre-frontal Cortex	AMZ1	0.09	0.05	lasso	6	0.04	2.4e-06	-12.4	12.6	1.6e-36	-0.89	0.01	0.99	TRUE
23	YFS	Blood	GNA12	0.23	0.15	bslmm	570	0.25	4.5e-82	5.9	-8.0	1.3e-15	0.47	1.00	0.00	TRUE
24	The Cancer Genome Atlas	Esophageal Carcinoma	AMZ1	0.18	0.05	blup	69	0.05	1.4e-02	7.6	-10.3	7.3e-25	0.75	0.01	0.67	FALSE
25	The Cancer Genome Atlas	Kidney Renal Clear Cell Carcinoma	GNA12	0.03	0.04	lasso	1	0.04	3.0e-05	-7.6	-7.6	3.8e-14	0.68	0.07	0.79	FALSE
26	The Cancer Genome Atlas	Brain Lower Grade Glioma	AMZ1	0.04	0.04	lasso	3	0.02	1.3e-03	7.6	8.8	1.1e-18	-0.67	0.03	0.93	FALSE
27	The Cancer Genome Atlas	Lung Adenocarcinoma	GNA12	0.03	0.01	enet	7	0.02	1.5e-03	4.8	-9.8	6.7e-23	0.76	0.06	0.74	FALSE
28	The Cancer Genome Atlas	Prostate Adenocarcinoma	AMZ1	0.08	0.01	blup	71	0.05	1.3e-05	-7.6	5.2	1.8e-07	-0.66	0.03	0.84	FALSE
29	The Cancer Genome Atlas	Thyroid Carcinoma	AMZ1	0.32	0.04	enet	19	0.20	3.3e-19	-9.2	5.6	2.6e-08	-0.57	0.15	0.85	TRUE