[Hub]/) : Traits : Trunk fat-free mass : ← →

chr16:52,772,129-54,846,383

Best TWAS P=4.35e-29 · Best GWAS P=3.4e-89 conditioned to NaN

Associated models

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
2	CommonMind	Brain Pre-frontal Cortex	FTO	0.11	0.00	bslmm	739	0.02	1.6e-03	0.78	11.2	4.4e-29	0.38	0.09	0.55	TRUE
33	GTEx	Testis	AKTIP	0.19	0.00	enet	26	0.00	1.9e-01	5.32	10.9	1.4e-27	0.51	0.03	0.40	TRUE
37	YFS	Blood	AKTIP	0.19	0.27	lasso	13	0.30	3.3e-99	9.15	8.2	1.7e-16	-0.01	1.00	0.00	TRUE
38	The Cancer Genome Atlas	Esophageal Carcinoma	RBL2	0.08	0.04	lasso	3	0.03	4.4e-02	9.15	7.5	7.2e-14	0.00	0.01	0.82	TRUE
19	GTEx	Esophagus Mucosa	RBL2	0.36	0.36	enet	37	0.37	2.9e-26	6.02	-6.9	4.5e-12	0.00	1.00	0.00	TRUE
28	GTEx	Prostate	RBL2	0.55	0.45	lasso	4	0.45	1.0e-12	5.93	-6.1	1.4e-09	0.04	0.99	0.00	TRUE
32	GTEx	Stomach	RBL2	0.33	0.26	enet	20	0.26	8.7e-13	6.02	-5.8	5.0e-09	0.04	1.00	0.00	TRUE
24	GTEx	Muscle Skeletal	RBL2	0.11	0.00	lasso	5	0.00	2.9e-01	8.38	-10.4	2.8e-25	-0.10	0.28	0.23	FALSE
42	The Cancer Genome Atlas	Pancreatic Adenocarcinoma	RBL2	0.11	0.08	blup	44	0.06	1.5e-03	8.37	-8.2	1.7e-16	-0.03	0.01	0.78	FALSE
3	CommonMind	Brain Pre-frontal Cortex	RBL2	0.22	0.24	enet	15	0.26	1.8e-31	5.93	-7.6	3.2e-14	0.02	1.00	0.00	FALSE
39	The Cancer Genome Atlas	Glioblastoma Multiforme	FTO	0.27	0.16	enet	13	0.14	6.7e-05	-1.98	7.5	5.5e-14	0.33	0.11	0.32	FALSE
9	GTEx	Artery Tibial	RBL2	0.16	0.17	enet	11	0.20	2.1e-15	6.05	-7.4	1.6e-13	0.02	1.00	0.00	FALSE
12	GTEx	Brain Cortex	RBL2	0.51	0.45	enet	12	0.46	3.5e-14	5.32	-7.2	5.4e-13	0.02	1.00	0.00	FALSE
31	GTEx	Spleen	RBL2	0.59	0.47	enet	51	0.46	3.2e-13	6.05	-7.0	1.9e-12	-0.06	1.00	0.00	FALSE
16	GTEx	Colon Sigmoid	RBL2	0.38	0.37	lasso	12	0.29	8.4e-11	6.02	-6.9	4.7e-12	0.03	1.00	0.00	FALSE
4	GTEx	Adipose Subcutaneous	RBL2	0.34	0.28	enet	18	0.30	1.0e-24	6.02	-6.8	1.0e-11	0.02	1.00	0.00	FALSE
41	The Cancer Genome Atlas	Brain Lower Grade Glioma	RBL2	0.03	0.06	enet	5	0.05	8.2e-07	5.32	-6.7	2.3e-11	0.04	0.83	0.17	FALSE
35	GTEx	Vagina	RBL2	0.41	0.37	enet	13	0.34	1.6e-08	6.30	-6.7	2.5e-11	0.03	0.89	0.01	FALSE
30	GTEx	Skin Sun Exposed Lower leg	RBL2	0.35	0.39	enet	25	0.37	2.9e-32	5.93	-6.6	5.2e-11	0.03	1.00	0.00	FALSE
10	GTEx	Brain Cerebellar Hemisphere	RBL2	0.55	0.55	enet	20	0.46	2.1e-13	6.02	-6.5	7.9e-11	0.04	1.00	0.00	FALSE
29	GTEx	Skin Not Sun Exposed Suprapubic	RBL2	0.35	0.33	enet	16	0.34	2.6e-19	5.93	-6.5	8.5e-11	0.03	1.00	0.00	FALSE
25	GTEx	Nerve Tibial	RBL2	0.46	0.52	enet	19	0.53	1.6e-43	5.93	-6.5	9.6e-11	0.04	1.00	0.00	FALSE
23	GTEx	Lung	RBL2	0.29	0.37	enet	16	0.35	9.1e-28	6.02	-6.5	1.0e-10	0.03	1.00	0.00	FALSE
11	GTEx	Brain Cerebellum	RBL2	0.66	0.72	enet	16	0.70	5.7e-28	6.05	-6.3	3.4e-10	0.05	1.00	0.00	FALSE
22	GTEx	Heart Left Ventricle	RBL2	0.12	0.11	enet	12	0.08	3.3e-05	5.93	-6.2	4.5e-10	-0.03	0.94	0.01	FALSE
21	GTEx	Heart Atrial Appendage	RBL2	0.28	0.14	enet	25	0.23	8.6e-11	5.93	-6.2	5.7e-10	0.03	1.00	0.00	FALSE
34	GTEx	Thyroid	RBL2	0.34	0.47	lasso	4	0.45	3.6e-38	6.02	-6.2	7.3e-10	0.04	1.00	0.00	FALSE
26	GTEx	Pancreas	RBL2	0.36	0.36	enet	26	0.36	5.9e-16	6.00	-6.2	7.9e-10	0.08	1.00	0.00	FALSE
27	GTEx	Pituitary	RBL2	0.36	0.39	lasso	6	0.40	4.5e-11	6.05	6.1	1.1e-09	-0.04	0.98	0.00	FALSE
7	GTEx	Artery Aorta	RBL2	0.27	0.21	enet	14	0.19	1.5e-10	5.93	-6.0	1.5e-09	0.04	1.00	0.00	FALSE
5	GTEx	Adipose Visceral Omentum	RBL2	0.30	0.27	lasso	2	0.27	4.3e-14	6.02	-6.0	1.8e-09	0.04	1.00	0.00	FALSE
8	GTEx	Artery Coronary	RBL2	0.36	0.33	enet	14	0.27	1.4e-09	6.05	-5.9	2.8e-09	0.05	1.00	0.00	FALSE
14	GTEx	Breast Mammary Tissue (Male)	RBL2	0.40	0.29	lasso	2	0.25	1.4e-06	5.94	-5.9	2.8e-09	0.04	0.60	0.02	FALSE
13	GTEx	Breast Mammary Tissue	RBL2	0.36	0.35	lasso	3	0.36	3.0e-19	5.94	-5.9	4.0e-09	0.04	1.00	0.00	FALSE
20	GTEx	Esophagus Muscularis	RBL2	0.36	0.38	enet	10	0.41	6.8e-27	6.00	-5.9	4.7e-09	0.05	1.00	0.00	FALSE
17	GTEx	Colon Transverse	RBL2	0.59	0.44	enet	13	0.52	4.4e-28	6.02	-5.8	5.9e-09	0.05	1.00	0.00	FALSE
18	GTEx	Esophagus Gastroesophageal Junction	RBL2	0.38	0.40	enet	17	0.38	1.1e-14	6.05	-5.8	6.8e-09	0.05	1.00	0.00	FALSE
40	The Cancer Genome Atlas	Brain Lower Grade Glioma	AKTIP	0.04	0.03	blup	42	0.05	1.9e-06	5.93	-5.6	1.7e-08	0.04	0.98	0.01	FALSE
36	NTR	Blood	RBL2	0.09	0.11	bslmm	419	0.11	1.1e-33	6.02	-5.6	1.8e-08	0.06	1.00	0.00	FALSE
15	GTEx	Breast Mammary Tissue (Female)	RBL2	0.47	0.27	lasso	7	0.20	1.1e-06	5.32	-5.5	3.8e-08	0.04	0.97	0.00	FALSE
6	GTEx	Adrenal Gland	RBL2	0.35	0.27	enet	22	0.25	2.3e-09	6.02	-5.4	5.8e-08	0.04	1.00	0.00	FALSE
1	CommonMind	Brain Pre-frontal Cortex	AKTIP	0.12	0.09	enet	10	0.08	1.9e-10	6.00	-5.2	1.8e-07	0.07	1.00	0.00	FALSE