TWAS
hub
About
Usage
Models
Genes
Traits
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Traits
:
Trunk predicted mass
:
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chr2:111,392,259-112,621,199
Best TWAS P=2.92e-08 · Best GWAS P=6.09e-08 conditioned to 1
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
BCL2L11
0.04
0.04
lasso
2
0.03
0.0002
5.4
-5.5
2.9e-08
-1.00
0.01
0.99
TRUE
2
The Cancer Genome Atlas
Prostate Adenocarcinoma
BCL2L11
0.04
0.02
lasso
3
0.02
0.0057
5.0
-5.3
1.4e-07
-0.61
0.03
0.45
FALSE