Best TWAS P=5.9e-09 · Best GWAS P=7.95e-10 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | AKT3 | 0.03 | 0.01 | blup | 155 | 0.01 | 0.029 | -5.9 | -5.8 | 8.0e-09 | 0.95 | 0.04 | 0.71 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | AKT3 | 0.02 | 0.00 | blup | 155 | 0.00 | 0.316 | -5.1 | -5.8 | 5.9e-09 | 0.97 | 0.04 | 0.73 | TRUE |