Best TWAS P=1.52e-07 · Best GWAS P=2.83e-11 conditioned to 1.49e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | LOC285733 | 0.16 | 0.14 | lasso | 6 | 0.23 | 1.4e-25 | -4.4 | -5.2 | 1.6e-07 | -0.44 | 0.16 | 0.81 | FALSE |
| 2 | The Cancer Genome Atlas | Pancreatic Adenocarcinoma | LOC285733 | 0.22 | 0.10 | blup | 67 | 0.08 | 2.6e-04 | -4.4 | -5.2 | 1.5e-07 | -0.45 | 0.08 | 0.71 | TRUE |