Best TWAS P=2e-07 · Best GWAS P=2.76e-06 conditioned to 0.56
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Pheochromocytoma and Paraganglioma | SHMT1 | 0.19 | 0.13 | blup | 40 | 0.11 | 3.1e-05 | -4.1 | 5.2 | 2e-07 | -0.84 | 0.01 | 0.9 | TRUE |