Best TWAS P=1.88e-10 · Best GWAS P=8.74e-13 conditioned to 2.5e-05
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FOXP1 | 0.17 | 0.09 | lasso | 5 | 0.06 | 3e-04 | 6.6 | -6.4 | 1.9e-10 | -0.59 | 0.12 | 0.67 | TRUE |