Best TWAS P=9.07e-14 · Best GWAS P=4.08e-11 conditioned to 0.37
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Subcutaneous | RP11-967K21.1 | 0.08 | 0.02 | lasso | 8 | 0.01 | 2.1e-02 | -6.6 | -7.5 | 9.1e-14 | 0.93 | 0.02 | 0.96 | TRUE |
| 2 | GTEx | Adrenal Gland | RP11-967K21.1 | 0.22 | 0.02 | lasso | 4 | 0.02 | 6.5e-02 | -6.3 | -6.6 | 5.3e-11 | 0.90 | 0.04 | 0.68 | FALSE |
| 6 | GTEx | Esophagus Muscularis | RP11-967K21.1 | 0.07 | 0.06 | lasso | 5 | 0.04 | 2.2e-03 | -6.5 | -6.5 | 5.9e-11 | 0.89 | 0.02 | 0.93 | FALSE |
| 4 | GTEx | Artery Tibial | RP11-967K21.1 | 0.09 | 0.10 | lasso | 11 | 0.07 | 2.4e-06 | -6.6 | -6.5 | 6.1e-11 | 0.92 | 0.01 | 0.99 | FALSE |
| 3 | GTEx | Artery Coronary | RP11-967K21.1 | 0.18 | 0.12 | lasso | 7 | 0.07 | 1.8e-03 | -6.4 | -6.5 | 6.5e-11 | 0.97 | 0.04 | 0.93 | FALSE |
| 5 | GTEx | Colon Transverse | RP11-967K21.1 | 0.12 | 0.07 | lasso | 8 | 0.05 | 1.6e-03 | -6.5 | -6.3 | 2.6e-10 | 0.91 | 0.03 | 0.95 | FALSE |
| 7 | GTEx | Thyroid | RP11-967K21.1 | 0.05 | 0.00 | enet | 7 | 0.00 | 2.8e-01 | -3.7 | -6.0 | 2.0e-09 | 0.63 | 0.06 | 0.61 | FALSE |