Best TWAS P=2.72e-07 · Best GWAS P=6.25e-10 conditioned to 0.000564
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Soft Tissue Sarcoma | FOXP1 | 0.17 | 0.09 | lasso | 5 | 0.06 | 3e-04 | 5.3 | -5.1 | 2.7e-07 | -0.81 | 0.07 | 0.8 | TRUE |