Best TWAS P=8.87e-09 · Best GWAS P=1.82e-08 conditioned to 0.525
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Aorta | SLC4A7 | 0.10 | 0.08 | enet | 15 | 0.08 | 5.4e-05 | -5.4 | -5.7 | 9.5e-09 | 0.83 | 0.01 | 0.98 | TRUE |
2 | The Cancer Genome Atlas | Ovarian Serous Cystadenocarcinoma | SLC4A7 | 0.08 | 0.02 | lasso | 4 | 0.04 | 1.4e-03 | 4.2 | -5.8 | 8.9e-09 | 0.30 | 0.02 | 0.38 | TRUE |