Best TWAS P=1.07e-08 · Best GWAS P=1.49e-08 conditioned to 0.0948
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | STXBP5 | 0.08 | 0.08 | enet | 17 | 0.09 | 2.4e-11 | 4.3 | -5.7 | 1.1e-08 | -0.82 | 0.17 | 0.83 | TRUE |
| 2 | ROSMAP | Brain Pre-frontal Cortex | RP11-361F15.2 | 0.05 | 0.06 | lasso | 4 | 0.05 | 1.8e-07 | 5.1 | -5.2 | 2.0e-07 | -0.86 | 0.06 | 0.94 | FALSE |