Best TWAS P=1.61e-07 · Best GWAS P=6.15e-06 conditioned to 0.666
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Head and Neck Squamous Cell Carcinoma | HDAC7 | 0.05 | 0.02 | blup | 85 | 0.01 | 0.0075 | -4.2 | -5.2 | 1.6e-07 | 0.82 | 0 | 0.6 | TRUE |