TWAS
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Traits
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Traits
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Heel bone mineral density (BMD) T-score, automated (left)
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chr9:96,102,832-97,571,455
Best TWAS P=9.21e-10 · Best GWAS P=5.99e-08 conditioned to 0.101
96.2M
96.4M
96.6M
96.8M
97M
97.2M
97.4M
97.6M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Breast Invasive Carcinoma
BARX1
0.04
0
blup
66
0.01
0.00063
4.6
-6.1
9.2e-10
-0.69
0.01
0.82
TRUE
1
GTEx
Esophagus Muscularis
PTPDC1
0.15
0
lasso
4
0.03
0.00609
4.6
-5.7
1.1e-08
-0.52
0.08
0.78
FALSE