Best TWAS P=1.1e-07 · Best GWAS P=4.61e-07 conditioned to 0.00012
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Colon Transverse | KNOP1 | 0.22 | 0.23 | enet | 19 | 0.24 | 9.8e-12 | -4.5 | -5.2 | 2.2e-07 | -0.25 | 0.06 | 0.92 | FALSE |
| 2 | GTEx | Esophagus Gastroesophageal Junction | KNOP1 | 0.51 | 0.44 | enet | 22 | 0.56 | 5.3e-24 | -4.3 | -5.1 | 2.8e-07 | -0.26 | 0.07 | 0.90 | FALSE |
| 3 | GTEx | Esophagus Gastroesophageal Junction | AC002550.5 | 0.62 | 0.54 | enet | 35 | 0.63 | 4.4e-29 | -4.6 | -5.3 | 1.1e-07 | -0.25 | 0.05 | 0.92 | TRUE |