Best TWAS P=8.1e-08 · Best GWAS P=8.41e-08 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | DPYSL4 | 0.13 | 0.12 | lasso | 7 | 0.16 | 3.1e-17 | 5.2 | 5.3 | 1.3e-07 | -0.90 | 0.01 | 0.99 | FALSE |
2 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | DPYSL4 | 0.13 | 0.11 | enet | 7 | 0.08 | 2.0e-04 | 5.2 | 5.4 | 8.1e-08 | -0.98 | 0.01 | 0.98 | TRUE |