Best TWAS P=1.68e-08 · Best GWAS P=1.35e-21 conditioned to 7.91e-16
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SNRPD2 | 0.03 | 0.02 | blup | 36 | 0.02 | 0.00015 | 4.1 | -5.6 | 2.1e-08 | 0.39 | 0.79 | 0.04 | FALSE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | SNRPD2 | 0.04 | 0.03 | enet | 7 | 0.03 | 0.00026 | 4.3 | -5.6 | 1.7e-08 | 0.36 | 0.41 | 0.09 | TRUE |