Best TWAS P=1.54e-07 · Best GWAS P=3.29e-20 conditioned to 4.48e-16
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Cells EBV-transformed lymphocytes | SAE1 | 0.21 | 0.09 | lasso | 3 | 0.07 | 2.0e-03 | -3.4 | -5.2 | 1.5e-07 | 0.77 | 0.06 | 0.67 | TRUE |
| 2 | METSIM | Adipose | SAE1 | 0.12 | 0.04 | lasso | 5 | 0.07 | 1.7e-10 | -4.1 | -5.2 | 2.4e-07 | 0.61 | 0.61 | 0.39 | FALSE |