Best TWAS P=1.32e-07 · Best GWAS P=8.46e-08 conditioned to 0.00576
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Colon Sigmoid | WDPCP | 0.15 | 0.05 | lasso | 4 | 0.03 | 3.0e-02 | 3.9 | 5.3 | 1.3e-07 | 0.59 | 0.12 | 0.74 | TRUE |
| 2 | GTEx | Thyroid | WDPCP | 0.07 | 0.03 | lasso | 6 | 0.06 | 2.1e-05 | 3.4 | 5.1 | 2.7e-07 | 0.46 | 0.05 | 0.94 | FALSE |