Best TWAS P=2.4e-07 · Best GWAS P=1.7e-07 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Muscle Skeletal | GAPVD1 | 0.13 | 0.10 | lasso | 3 | 0.09 | 4.7e-09 | -5.2 | 5.2 | 2.4e-07 | -0.99 | 0.02 | 0.98 | TRUE |
| 2 | GTEx | Thyroid | GAPVD1 | 0.05 | 0.05 | enet | 13 | 0.01 | 6.6e-02 | -5.1 | -5.2 | 2.4e-07 | 0.99 | 0.02 | 0.98 | FALSE |